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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1e62 FAD Ferredoxin--NADP reductase 1.18.1.2

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1e62 FADFerredoxin--NADP reductase 1.18.1.2 1.293
1e64 FADFerredoxin--NADP reductase 1.18.1.2 1.284
1ogi FADFerredoxin--NADP reductase 1.18.1.2 1.282
1e63 FADFerredoxin--NADP reductase 1.18.1.2 1.265
1bjk FADFerredoxin--NADP reductase 1.18.1.2 1.251
1gr1 FADFerredoxin--NADP reductase 1.18.1.2 1.249
1go2 FADFerredoxin--NADP reductase 1.18.1.2 1.248
1ogj FADFerredoxin--NADP reductase 1.18.1.2 1.247
4c43 FADFerredoxin--NADP reductase 1.18.1.2 1.243
1que FADFerredoxin--NADP reductase 1.18.1.2 1.234
1bx1 FADFerredoxin--NADP reductase, chloroplastic 1.18.1.2 1.216
1qgy FADFerredoxin--NADP reductase 1.18.1.2 1.216
1qh0 FADFerredoxin--NADP reductase 1.18.1.2 1.211
3zc3 FADFerredoxin--NADP reductase 1.18.1.2 1.207
1gjr FADFerredoxin--NADP reductase 1.18.1.2 1.205
3mhp FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic 1.18.1.2 1.204
1h85 FADFerredoxin--NADP reductase 1.18.1.2 1.202
1b2r FADFerredoxin--NADP reductase 1.18.1.2 1.200
1qgz FADFerredoxin--NADP reductase 1.18.1.2 1.197
1h42 FADFerredoxin--NADP reductase 1.18.1.2 1.195
3zbt FADFerredoxin--NADP reductase 1.18.1.2 1.184
1fnd FADFerredoxin--NADP reductase, chloroplastic 1.18.1.2 1.179
1gaw FADFerredoxin / 1.179
3vo2 FADFerredoxin--NADP reductase / 1.178
1fnc FDAFerredoxin--NADP reductase, chloroplastic 1.18.1.2 1.172
1qg0 FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic 1.18.1.2 1.165
1w34 FADFerredoxin--NADP reductase 1.18.1.2 1.156
2b5o FADFerredoxin--NADP reductase 1.18.1.2 1.154
1bx0 FADFerredoxin--NADP reductase, chloroplastic 1.18.1.2 1.150
2vyq FADFerredoxin--NADP reductase 1.18.1.2 1.147
1fnb FADFerredoxin--NADP reductase, chloroplastic 1.18.1.2 1.142
4bpr FADFerredoxin--NADP reductase 1.18.1.2 1.131
1w35 FADFerredoxin--NADP reductase 1.18.1.2 1.123
3w5u FADFerredoxin / 1.110
1sm4 FADFerredoxin--NADP reductase / 1.092
1gaq FADFerredoxin / 1.079
2rc6 FADFerredoxin--NADP reductase / 1.074
1ewy FADFerredoxin--NADP reductase 1.18.1.2 1.015
2rc5 FADFerredoxin--NADP reductase / 1.009
3qfs FADNADPH--cytochrome P450 reductase / 1.007
2xnc FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic 1.18.1.2 0.997
1f20 FADNitric oxide synthase, brain 1.14.13.39 0.996
4af7 FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic 1.18.1.2 0.978
3ojw FADNADPH--cytochrome P450 reductase / 0.959
4yaf FADNADPH--cytochrome P450 reductase / 0.943
3qft FADNADPH--cytochrome P450 reductase / 0.939
4y9u FADNADPH--cytochrome P450 reductase / 0.937
4uaj FADNa(+)-translocating NADH-quinone reductase subunit F / 0.926
1w87 FADFerredoxin--NADP reductase 1.18.1.2 0.921
1tll FADNitric oxide synthase, brain 1.14.13.39 0.910
4y7c FADNADPH--cytochrome P450 reductase / 0.910
1ja1 FADNADPH--cytochrome P450 reductase / 0.909
4wqm FADToluene-4-monooxygenase electron transfer component 1.18.1.3 0.902
3qfr FADNADPH--cytochrome P450 reductase / 0.898
4y9r FADNADPH--cytochrome P450 reductase / 0.891
3w5h FADNADH-cytochrome b5 reductase 3 1.6.2.2 0.883
1j9z FADNADPH--cytochrome P450 reductase / 0.878
3qe2 FADNADPH--cytochrome P450 reductase / 0.877
1ja0 FADNADPH--cytochrome P450 reductase / 0.872
1cqx FADFlavohemoprotein / 0.868
3jqr FADFerredoxin--NADP reductase, apicoplast / 0.864
3w2e FADNADH-cytochrome b5 reductase 3 1.6.2.2 0.862
3qfc FADNADPH--cytochrome P450 reductase / 0.856
1umk FADNADH-cytochrome b5 reductase 3 1.6.2.2 0.852
4yau FADNADPH--cytochrome P450 reductase / 0.851
2ok8 FADFerredoxin--NADP reductase, apicoplast / 0.848
2bf4 FADNADPH--cytochrome P450 reductase / 0.841
3fpk FADFerredoxin-NADP reductase / 0.841
2bpo FADNADPH--cytochrome P450 reductase / 0.838
1amo FADNADPH--cytochrome P450 reductase / 0.827
3w2f FADNADH-cytochrome b5 reductase 3 1.6.2.2 0.822
3ojx FADNADPH--cytochrome P450 reductase / 0.821
2bn4 FADNADPH--cytochrome P450 reductase / 0.813
2eix FADNADH-cytochrome b5 reductase / 0.805
2ok7 FADFerredoxin--NADP reductase, apicoplast / 0.801
4yao FADNADPH--cytochrome P450 reductase / 0.798
1krh FADBenzoate 1,2-dioxygenase electron transfer component 1.18.1.3 0.785
2pia FMNPhthalate dioxygenase reductase / 0.782
1i7p FADNADH-cytochrome b5 reductase 3 1.6.2.2 0.780
2r6h FADNa(+)-translocating NADH-quinone reductase subunit F / 0.771
4af6 FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic 1.18.1.2 0.764
1gvh FADFlavohemoprotein / 0.752
2gpj FADSiderophore-interacting protein / 0.737
1ep3 FADDihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit / 0.733
4k1x FADNADPH:ferredoxin reductase / 0.724
2bgj FADNADPH:ferredoxin reductase / 0.721
2i51 FMNPyridoxamine 5'-phosphate oxidase-related, FMN-binding / 0.714
1fdr FADFerredoxin--NADP reductase 1.18.1.2 0.712
2cnd FADNitrate reductase [NADH] 1.7.1.1 0.697
3e4v FMNUncharacterized protein / 0.694
1ib0 FADNADH-cytochrome b5 reductase 3 1.6.2.2 0.684
3q9t FAYUncharacterized protein / 0.683
2ptf FMNUncharacterized protein MTH_863 / 0.682
2iml FMNUncharacterized protein / 0.671
3gdp FAD(R)-mandelonitrile lyase 2 4.1.2.10 0.670
3vqr FADPutative oxidoreductase / 0.670
2dw4 FADLysine-specific histone demethylase 1A 1 0.669
3znp FADD-amino-acid oxidase 1.4.3.3 0.667
1c0k FADD-amino-acid oxidase 1.4.3.3 0.665
1i0s FMNFerric-chelate reductase (NAD(P)H) / 0.664
1h83 FADPolyamine oxidase 1.5.3.14 0.663
1rz1 FADPhenol 2-hydroxylase component B / 0.663
3r5y F42Uncharacterized protein / 0.662
2igo FADPyranose 2-oxidase / 0.660
3pft FMNFlavin reductase / 0.660
3v76 FDAUncharacterized protein / 0.659
4ees FMNPhototropin-2 2.7.11.1 0.658
3if9 FADGlycine oxidase 1.4.3.19 0.657
3pl8 FADPyranose 2-oxidase / 0.657
3t37 FADPyridoxine 4-oxidase / 0.657
4iv6 FDAIsovaleryl-CoA dehydrogenase / 0.655
3r5z F42Uncharacterized protein / 0.653