sc-PDB

List of CHEMBLId :

This value allows a number of roughly comparable measures of half-maximal response concentration/potency/affinity to be compared on a negative logarithmic scale (e.g., an IC50 measurement of 1nM would have a pChEMBL value of 9).

Uniprot Annotation

Name:	Geranyl diphosphate synthase large subunit
ID:	Q9SBR3_MENPI
AC:	Q9SBR3
Organism:	Mentha piperita
Reign:	Eukaryota
TaxID:	34256
EC Number:	/

---

Chains:

Chain Name:	Percentage of Residues within binding site
D	100 %

---

Ligand binding site composition:

B-Factor:	42.613
Number of residues:	27
Including
Standard Amino Acids:	22
Non Standard Amino Acids:	3
Water Molecules:	2
Cofactors:
Metals:	MG MG

---

Cavity properties

Ligandability	Volume (Å3)
0.224	722.250

% Hydrophobic	% Polar
43.93	56.07
According to VolSite

HET Code:	DST
Formula:	C5H11O6P2S
Molecular weight:	261.150 g/mol
DrugBank ID:	DB02270
Buried Surface Area:	67.27 %
Polar Surface area:	157.47 Å2

Number of
H-Bond Acceptors:	7
H-Bond Donors:	0
Rings:	0
Aromatic rings:	0
Anionic atoms:	3
Cationic atoms:	0
Rule of Five Violation:	0
Rotatable Bonds:	6

---

Mass center Coordinates

X	Y	Z
-30.6907	-13.6623	16.499

• 2D View
• 3D View