1.400 Å
X-ray
2008-05-22
Name: | Dihydrofolate reductase |
---|---|
ID: | DYR_MOUSE |
AC: | P00375 |
Organism: | Mus musculus |
Reign: | Eukaryota |
TaxID: | 10090 |
EC Number: | 1.5.1.3 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 13.172 |
---|---|
Number of residues: | 28 |
Including | |
Standard Amino Acids: | 26 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 1 |
Cofactors: | NDP |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.034 | 604.125 |
% Hydrophobic | % Polar |
---|---|
61.45 | 38.55 |
According to VolSite |
HET Code: | Q22 |
---|---|
Formula: | C21H19N7O |
Molecular weight: | 385.422 g/mol |
DrugBank ID: | DB08448 |
Buried Surface Area: | 70.03 % |
Polar Surface area: | 127.07 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 8 |
H-Bond Donors: | 3 |
Rings: | 5 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 2 |
X | Y | Z |
---|---|---|
-5.07683 | 2.19697 | 14.8553 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
N4' | O | ILE- 7 | 2.9 | 156.23 | H-Bond (Ligand Donor) |
N1' | OE2 | GLU- 30 | 2.82 | 165.42 | H-Bond (Ligand Donor) |
N2' | OE1 | GLU- 30 | 2.79 | 173.28 | H-Bond (Ligand Donor) |
N4' | O | VAL- 115 | 3.12 | 134.36 | H-Bond (Ligand Donor) |