2.000 Å
X-ray
2005-10-02
| Name: | Polyprotein |
|---|---|
| ID: | Q99AU2_9HEPC |
| AC: | Q99AU2 |
| Organism: | Hepatitis C virus subtype 1b |
| Reign: | Viruses |
| TaxID: | 31647 |
| EC Number: | / |
| Chain Name: | Percentage of Residues within binding site |
|---|---|
| B | 100 % |
| B-Factor: | 25.543 |
|---|---|
| Number of residues: | 27 |
| Including | |
| Standard Amino Acids: | 27 |
| Non Standard Amino Acids: | 0 |
| Water Molecules: | 0 |
| Cofactors: | |
| Metals: | |
| Ligandability | Volume (Å3) |
|---|---|
| 0.629 | 371.250 |
| % Hydrophobic | % Polar |
|---|---|
| 59.09 | 40.91 |
| According to VolSite | |

| HET Code: | CCT |
|---|---|
| Formula: | C19H13N2O4S2 |
| Molecular weight: | 397.448 g/mol |
| DrugBank ID: | DB07547 |
| Buried Surface Area: | 59.54 % |
| Polar Surface area: | 146.71 Å2 |
| Number of | |
|---|---|
| H-Bond Acceptors: | 5 |
| H-Bond Donors: | 1 |
| Rings: | 3 |
| Aromatic rings: | 3 |
| Anionic atoms: | 1 |
| Cationic atoms: | 0 |
| Rule of Five Violation: | 0 |
| Rotatable Bonds: | 5 |
| X | Y | Z |
|---|---|---|
| -9.31696 | 32.6825 | -29.6856 |
Image generated by PoseView
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
| Ligand | Protein | Interaction | |||
|---|---|---|---|---|---|
| Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
| C6 | CD1 | LEU- 419 | 3.95 | 0 | Hydrophobic |
| S11 | CD2 | LEU- 419 | 3.8 | 0 | Hydrophobic |
| C5 | CD2 | LEU- 419 | 3.67 | 0 | Hydrophobic |
| C22 | CD1 | LEU- 419 | 3.79 | 0 | Hydrophobic |
| C23 | CB | ARG- 422 | 3.99 | 0 | Hydrophobic |
| C1 | SD | MET- 423 | 3.61 | 0 | Hydrophobic |
| C22 | CB | MET- 423 | 3.58 | 0 | Hydrophobic |
| C25 | CB | HIS- 475 | 3.97 | 0 | Hydrophobic |
| O16 | N | SER- 476 | 2.68 | 151.63 | H-Bond (Protein Donor) |
| O15 | N | TYR- 477 | 2.69 | 156.13 | H-Bond (Protein Donor) |
| C25 | CE1 | TYR- 477 | 4.06 | 0 | Hydrophobic |
| S11 | CD1 | ILE- 482 | 3.65 | 0 | Hydrophobic |
| C4 | CG2 | ILE- 482 | 3.73 | 0 | Hydrophobic |
| C21 | CD1 | LEU- 497 | 3.92 | 0 | Hydrophobic |
| C1 | CB | LEU- 497 | 4.08 | 0 | Hydrophobic |
| C22 | CE3 | TRP- 528 | 3.31 | 0 | Hydrophobic |
| C19 | CB | TRP- 528 | 3.78 | 0 | Hydrophobic |