2.000 Å
X-ray
2005-10-02
Name: | Polyprotein |
---|---|
ID: | Q99AU2_9HEPC |
AC: | Q99AU2 |
Organism: | Hepatitis C virus subtype 1b |
Reign: | Viruses |
TaxID: | 31647 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 25.543 |
---|---|
Number of residues: | 27 |
Including | |
Standard Amino Acids: | 27 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.629 | 371.250 |
% Hydrophobic | % Polar |
---|---|
59.09 | 40.91 |
According to VolSite |
HET Code: | CCT |
---|---|
Formula: | C19H13N2O4S2 |
Molecular weight: | 397.448 g/mol |
DrugBank ID: | DB07547 |
Buried Surface Area: | 59.54 % |
Polar Surface area: | 146.71 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 5 |
H-Bond Donors: | 1 |
Rings: | 3 |
Aromatic rings: | 3 |
Anionic atoms: | 1 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 5 |
X | Y | Z |
---|---|---|
-9.31696 | 32.6825 | -29.6856 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C6 | CD1 | LEU- 419 | 3.95 | 0 | Hydrophobic |
S11 | CD2 | LEU- 419 | 3.8 | 0 | Hydrophobic |
C5 | CD2 | LEU- 419 | 3.67 | 0 | Hydrophobic |
C22 | CD1 | LEU- 419 | 3.79 | 0 | Hydrophobic |
C23 | CB | ARG- 422 | 3.99 | 0 | Hydrophobic |
C1 | SD | MET- 423 | 3.61 | 0 | Hydrophobic |
C22 | CB | MET- 423 | 3.58 | 0 | Hydrophobic |
C25 | CB | HIS- 475 | 3.97 | 0 | Hydrophobic |
O16 | N | SER- 476 | 2.68 | 151.63 | H-Bond (Protein Donor) |
O15 | N | TYR- 477 | 2.69 | 156.13 | H-Bond (Protein Donor) |
C25 | CE1 | TYR- 477 | 4.06 | 0 | Hydrophobic |
S11 | CD1 | ILE- 482 | 3.65 | 0 | Hydrophobic |
C4 | CG2 | ILE- 482 | 3.73 | 0 | Hydrophobic |
C21 | CD1 | LEU- 497 | 3.92 | 0 | Hydrophobic |
C1 | CB | LEU- 497 | 4.08 | 0 | Hydrophobic |
C22 | CE3 | TRP- 528 | 3.31 | 0 | Hydrophobic |
C19 | CB | TRP- 528 | 3.78 | 0 | Hydrophobic |