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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4nfhNAJAlcohol dehydrogenase E chain1.1.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4nfhNAJAlcohol dehydrogenase E chain1.1.1.11.000
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.681
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.620
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.618
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.611
3oq6NAJAlcohol dehydrogenase E chain1.1.1.10.579
5kjeNAJAlcohol dehydrogenase E chain1.1.1.10.563
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.554
5cdgNAJAlcohol dehydrogenase E chain1.1.1.10.536
1hldNADAlcohol dehydrogenase E chain1.1.1.10.535
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.535
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.518
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.502
5kcpNAJAlcohol dehydrogenase E chain1.1.1.10.501
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.499
1a71NADAlcohol dehydrogenase E chain1.1.1.10.498
1adcPADAlcohol dehydrogenase E chain1.1.1.10.496
1hetNADAlcohol dehydrogenase E chain1.1.1.10.496
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.491
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.484
5cdtNAJAlcohol dehydrogenase E chain1.1.1.10.483
1mgoNADAlcohol dehydrogenase E chain1.1.1.10.479
5kjfNAJAlcohol dehydrogenase E chain1.1.1.10.479
5kj1NAJAlcohol dehydrogenase E chain1.1.1.10.471
1hszNADAlcohol dehydrogenase 1B1.1.1.10.463
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.461
5cdsNAJAlcohol dehydrogenase E chain1.1.1.10.451
1axgNADAlcohol dehydrogenase E chain1.1.1.10.450
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.447
1hf3NADAlcohol dehydrogenase E chain1.1.1.10.446
1axeNADAlcohol dehydrogenase E chain1.1.1.10.443
1p0fNAPNADP-dependent alcohol dehydrogenase1.1.1.20.441
1heuNADAlcohol dehydrogenase E chain1.1.1.10.440
4ng5PFBAlcohol dehydrogenase E chain1.1.1.10.440