Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4ips1G4Mycocyclosin synthase1.14.21.9

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4ips1G4Mycocyclosin synthase1.14.21.91.000
4ipw1G7Mycocyclosin synthase1.14.21.90.792
4ict1EDMycocyclosin synthase1.14.21.90.741
4iq71G9Mycocyclosin synthase1.14.21.90.625
4ktf1TMCytochrome P450/0.589
4g48PZBMycocyclosin synthase1.14.21.90.582
4ktl1CQCytochrome P450/0.581
4g2gTDHMycocyclosin synthase1.14.21.90.576
4g47TZFMycocyclosin synthase1.14.21.90.524
4ktkKTKCytochrome P450/0.518