sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4b5o | ACO | Alpha-tubulin N-acetyltransferase 1 |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 4b5o | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 1.000 | |
| 4u9y | COA | Alpha-tubulin N-acetyltransferase 1 | / | 0.713 | |
| 3vwd | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 0.677 | |
| 4gs4 | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 0.642 | |
| 3vwe | COA | Alpha-tubulin N-acetyltransferase 1 | / | 0.627 | |
| 4if5 | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 0.624 | |
| 4b5p | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 0.616 | |
| 4u9z | COA | Alpha-tubulin N-acetyltransferase 1 | / | 0.596 | |
| 4hkf | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 0.529 | |
| 4mxe | ACO | N-acetyltransferase ESCO1 | 2.3.1 | 0.510 | |
| 2psw | COA | N-alpha-acetyltransferase 50 | / | 0.498 | |
| 4h6u | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 0.498 | |
| 4h6z | ACO | Alpha-tubulin N-acetyltransferase 1 | / | 0.491 | |
| 2wpw | ACO | Orf14 | / | 0.488 | |
| 2ou2 | ACO | Histone acetyltransferase KAT5 | / | 0.474 | |
| 3to6 | LYS_CMC | Histone acetyltransferase ESA1 | / | 0.473 | |
| 2y0m | ACO | Histone acetyltransferase KAT8 | / | 0.465 | |
| 4lx9 | ACO | N-alpha-acetyltransferase | 2.3.1 | 0.457 | |
| 2cy2 | ACO | Probable acetyltransferase | / | 0.455 | |
| 2giv | ACO | Histone acetyltransferase KAT8 | / | 0.453 | |
| 2ob0 | ACO | N-alpha-acetyltransferase 50 | / | 0.452 | |
| 2a4n | COA | Aac(6')-Ii protein | / | 0.449 | |
| 4ag7 | COA | Glucosamine 6-phosphate N-acetyltransferase | / | 0.448 | |
| 3k9u | ACO | Spermidine N(1)-acetyltransferase | / | 0.445 | |
| 5kgp | ACO | Predicted acetyltransferase | / | 0.444 |