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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4awp99AHeat shock protein HSP 90-alpha

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4awp99AHeat shock protein HSP 90-alpha/1.000
4awo99BHeat shock protein HSP 90-alpha/0.690
4awq592Heat shock protein HSP 90-alpha/0.655
3inwJZBHeat shock protein HSP 90-alpha/0.542
3inxJZCHeat shock protein HSP 90-alpha/0.534
4efuEFUHeat shock protein HSP 90-alpha/0.530
4nh82LCHeat shock protein HSP 90-alpha/0.515
3o0iP54Heat shock protein HSP 90-alpha/0.512
4hy6FJ1Heat shock protein HSP 90-alpha/0.510
4bqg50QHeat shock protein HSP 90-alpha/0.509
3mnrSD1Heat shock protein HSP 90-alpha/0.508
3qdd94MHeat shock protein HSP 90-alpha/0.503
1uyePU9Heat shock protein HSP 90-alpha/0.502
1uy8PU5Heat shock protein HSP 90-alpha/0.501
1uy6PU3Heat shock protein HSP 90-alpha/0.498
2wi72KLHeat shock protein HSP 90-alpha/0.498
2ykjYKJHeat shock protein HSP 90-alpha/0.495
3ft8MOJHeat shock protein HSP 90-alpha/0.489
1uykPUXHeat shock protein HSP 90-alpha/0.488
2qg2A91Heat shock protein HSP 90-alpha/0.488
1uyhPU0Heat shock protein HSP 90-alpha/0.484
1uy9PU6Heat shock protein HSP 90-alpha/0.482
1uymPU3Heat shock protein HSP 90-beta/0.480
2ykcYKCHeat shock protein HSP 90-alpha/0.479
1uydPU8Heat shock protein HSP 90-alpha/0.478
1uyfPU1Heat shock protein HSP 90-alpha/0.478
2fwyH64Heat shock protein HSP 90-alpha/0.473
1uyiPUZHeat shock protein HSP 90-alpha/0.470
2ykbYKBHeat shock protein HSP 90-alpha/0.467
3o6o94MHeat shock protein 83/0.467
3hz137DHeat shock protein HSP 90-alpha/0.464
4eftEFTHeat shock protein HSP 90-alpha/0.464
2fwzH71Heat shock protein HSP 90-alpha/0.461
2wi4ZZ4Heat shock protein HSP 90-alpha/0.460
2yk2YJXHeat shock protein HSP 90-alpha/0.459
3hz5Z64Heat shock protein HSP 90-alpha/0.459
3opdHIEHeat shock protein 83/0.459
1uy7PU4Heat shock protein HSP 90-alpha/0.458
2yjxYJXHeat shock protein HSP 90-alpha/0.457
2h55DZ8Heat shock protein HSP 90-alpha/0.456
2ykeYKEHeat shock protein HSP 90-alpha/0.453
1uycPU7Heat shock protein HSP 90-alpha/0.451
2yee2ECHeat shock protein HSP 90-alpha/0.451