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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3rqmH4BNitric oxide synthase, brain1.14.13.39

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity
Align
3rqmH4BNitric oxide synthase, brain1.14.13.391.000
3pngH4BNitric oxide synthase, brain1.14.13.390.826
3rqmX2ENitric oxide synthase, brain1.14.13.390.823
3pnfH4BNitric oxide synthase, brain1.14.13.390.730
4luxH4BNitric oxide synthase, brain1.14.13.390.723
3ufuH4BNitric oxide synthase, brain1.14.13.390.714
3ufqH4BNitric oxide synthase, brain1.14.13.390.707
3ufrH4BNitric oxide synthase, brain1.14.13.390.706
4cx3H4BNitric oxide synthase, brain1.14.13.390.699
3png8CXNitric oxide synthase, brain1.14.13.390.695
3nlnH4BNitric oxide synthase, brain1.14.13.390.694
4cx5HW8Nitric oxide synthase, brain1.14.13.390.690
4imtH4BNitric oxide synthase, brain1.14.13.390.682
3jx3H4BNitric oxide synthase, brain1.14.13.390.679
3nlyH4BNitric oxide synthase, brain1.14.13.390.678
4jsiH4BNitric oxide synthase, brain1.14.13.390.677
3nlzH4BNitric oxide synthase, brain1.14.13.390.676
1k2tH4BNitric oxide synthase, brain1.14.13.390.668
3jwtH4BNitric oxide synthase, brain1.14.13.390.667
3rqjH4BNitric oxide synthase, brain1.14.13.390.660
4jsgH4BNitric oxide synthase, brain1.14.13.390.659
4fvzH4BNitric oxide synthase, brain1.14.13.390.658
1k2uH4BNitric oxide synthase, brain1.14.13.390.657
3pneH4BNitric oxide synthase, brain1.14.13.390.652
2hx4H4BNitric oxide synthase, brain1.14.13.390.649
3jx5H4BNitric oxide synthase, brain1.14.13.390.648
3n5wXFJNitric oxide synthase, brain1.14.13.390.641
3b3nH4BNitric oxide synthase, brain1.14.13.390.639
4cx5H4BNitric oxide synthase, brain1.14.13.390.636
3nljH4BNitric oxide synthase, brain1.14.13.390.635
3n5yH4BNitric oxide synthase, brain1.14.13.390.630
4euxHW1Nitric oxide synthase, brain1.14.13.390.630
4jsfH4BNitric oxide synthase, brain1.14.13.390.627
4fw0H4BNitric oxide synthase, brain1.14.13.390.624
3jx2H4BNitric oxide synthase, brain1.14.13.390.622
3ufvH4BNitric oxide synthase, brain1.14.13.390.621
3nlvH4BNitric oxide synthase, brain1.14.13.390.620
3pnf8BXNitric oxide synthase, brain1.14.13.390.619
3rqlH4BNitric oxide synthase, brain1.14.13.390.619
4euxH4BNitric oxide synthase, brain1.14.13.390.618
3ufuHW8Nitric oxide synthase, brain1.14.13.390.617
4imwH4BNitric oxide synthase, brain1.14.13.390.614
3jwvH4BNitric oxide synthase, brain1.14.13.390.612
1om5H4BNitric oxide synthase, brain1.14.13.390.610
1rs6H4BNitric oxide synthase, brain1.14.13.390.610
3tylH4BNitric oxide synthase, brain1.14.13.390.609
4cx3HW8Nitric oxide synthase, brain1.14.13.390.607
4luxQJ8Nitric oxide synthase, brain1.14.13.390.607
3nnyH4BNitric oxide synthase, brain1.14.13.390.605
3nlpH4BNitric oxide synthase, brain1.14.13.390.603
3nlnJRSNitric oxide synthase, brain1.14.13.390.602
3nlqH4BNitric oxide synthase, brain1.14.13.390.602
3ufrH5WNitric oxide synthase, brain1.14.13.390.602
3rqkH4BNitric oxide synthase, brain1.14.13.390.601
3n5vH4BNitric oxide synthase, brain1.14.13.390.600
3nnzH4BNitric oxide synthase, brain1.14.13.390.600
3svqH4BNitric oxide synthase, brain1.14.13.390.600
3n62XFJNitric oxide synthase, brain1.14.13.390.598
3uftH4BNitric oxide synthase, brain1.14.13.390.598
3n5xXFKNitric oxide synthase, brain1.14.13.390.597
4cx4H4BNitric oxide synthase, brain1.14.13.390.596
4k5gH4BNitric oxide synthase, brain1.14.13.390.595
3b3mH4BNitric oxide synthase, brain1.14.13.390.594
4fvxH4BNitric oxide synthase, brain1.14.13.390.593
1m00H4BNitric oxide synthase, brain1.14.13.390.591
3b3pH4BNitric oxide synthase, brain1.14.13.390.591
3ufpH4BNitric oxide synthase, brain1.14.13.390.591
4k5eH4BNitric oxide synthase, brain1.14.13.390.591
3b3oH4BNitric oxide synthase, brain1.14.13.390.586
3n5zH4BNitric oxide synthase, brain1.14.13.390.585
1rs7H4BNitric oxide synthase, brain1.14.13.390.582
4imt1EWNitric oxide synthase, brain1.14.13.390.578
3jwuH4BNitric oxide synthase, brain1.14.13.390.577
3ufsH4BNitric oxide synthase, brain1.14.13.390.577
3nlz3XDNitric oxide synthase, brain1.14.13.390.576
3ufwH4BNitric oxide synthase, brain1.14.13.390.576
4k5dH4BNitric oxide synthase, brain1.14.13.390.576
3tymH4BNitric oxide synthase, brain1.14.13.390.575
3ufqHW5Nitric oxide synthase, brain1.14.13.390.575
1zzqH4BNitric oxide synthase, brain1.14.13.390.573
3jwtJI5Nitric oxide synthase, brain1.14.13.390.572
5aglH4BNitric oxide synthase, brain1.14.13.390.571
4imuH4BNitric oxide synthase, brain1.14.13.390.570
3jx6H4BNitric oxide synthase, brain1.14.13.390.569
3n65XFJNitric oxide synthase, brain1.14.13.390.569
3nlkH4BNitric oxide synthase, brain1.14.13.390.567
4jshH4BNitric oxide synthase, brain1.14.13.390.566
3svpH4BNitric oxide synthase, brain1.14.13.390.564
3nly3XCNitric oxide synthase, brain1.14.13.390.561
3rqlX2DNitric oxide synthase, brain1.14.13.390.561
1zzuH4BNitric oxide synthase, brain1.14.13.390.558
2hx3H4BNitric oxide synthase, brain1.14.13.390.558
3n61H4BNitric oxide synthase, brain1.14.13.390.557
1p6kH4BNitric oxide synthase, brain1.14.13.390.556
3nlwH4BNitric oxide synthase, brain1.14.13.390.556
4gqeH4BNitric oxide synthase, brain1.14.13.390.556
3jx4H4BNitric oxide synthase, brain1.14.13.390.555
3pne8AXNitric oxide synthase, brain1.14.13.390.555
3ufoH4BNitric oxide synthase, brain1.14.13.390.555
4jseH4BNitric oxide synthase, brain1.14.13.390.554
3ufoHW4Nitric oxide synthase, brain1.14.13.390.553
3fc5H4BNitric oxide synthase, brain1.14.13.390.552
3dqrH4BNitric oxide synthase, brain1.14.13.390.550
3jt7H4BNitric oxide synthase, brain1.14.13.390.550
3jx2JI4Nitric oxide synthase, brain1.14.13.390.550
4fvyH4BNitric oxide synthase, brain1.14.13.390.548
3nloH4BNitric oxide synthase, brain1.14.13.390.547
1p6jH4BNitric oxide synthase, brain1.14.13.390.544
4jsfQJ4Nitric oxide synthase, brain1.14.13.390.544
4jsiQ05Nitric oxide synthase, brain1.14.13.390.544
4k5gQ13Nitric oxide synthase, brain1.14.13.390.542
1r35H4BNitric oxide synthase, inducible1.14.13.390.539
3nlrH4BNitric oxide synthase, brain1.14.13.390.538
3jx5J14Nitric oxide synthase, brain1.14.13.390.537
3jx6JI5Nitric oxide synthase, brain1.14.13.390.535
3ufvHW9Nitric oxide synthase, brain1.14.13.390.535
3rqjY2BNitric oxide synthase, brain1.14.13.390.534
4cx4HW9Nitric oxide synthase, brain1.14.13.390.534
3nljJRRNitric oxide synthase, brain1.14.13.390.531
3nlv3XANitric oxide synthase, brain1.14.13.390.531
3ufwHW0Nitric oxide synthase, brain1.14.13.390.530
3nlqJRRNitric oxide synthase, brain1.14.13.390.529
3jx0JI4Nitric oxide synthase, brain1.14.13.390.528
1zzrH4BNitric oxide synthase, brain1.14.13.390.527
4k5fH4BNitric oxide synthase, brain1.14.13.390.527
3e7gH4BNitric oxide synthase, inducible1.14.13.390.526
4imw1EVNitric oxide synthase, brain1.14.13.390.524
4jsgQ10Nitric oxide synthase, brain1.14.13.390.523
1mmvH4BNitric oxide synthase, brain1.14.13.390.522
3svpJK5Nitric oxide synthase, brain1.14.13.390.522
3tylAXWNitric oxide synthase, brain1.14.13.390.522
2g6iHBINitric oxide synthase, brain1.14.13.390.520
3jx3JI5Nitric oxide synthase, brain1.14.13.390.520
3nlw3XFNitric oxide synthase, brain1.14.13.390.520
5agkH4BNitric oxide synthase, brain1.14.13.390.520
3dwjH4BNitric oxide synthase, inducible1.14.13.390.514
3jtaH4BNitric oxide synthase, brain1.14.13.390.514
3n63XFNNitric oxide synthase, brain1.14.13.390.514
3nny59RNitric oxide synthase, brain1.14.13.390.514
2g6j7APNitric oxide synthase, brain1.14.13.390.513
3q99H4BNitric oxide synthase, brain1.14.13.390.513
3svqJK4Nitric oxide synthase, brain1.14.13.390.513
4k5d1Q6Nitric oxide synthase, brain1.14.13.390.513
3e6tH4BNitric oxide synthase, inducible1.14.13.390.512
3jwsJI4Nitric oxide synthase, brain1.14.13.390.511
3nw2H4BNitric oxide synthase, inducible1.14.13.390.511
3rqkX2CNitric oxide synthase, brain1.14.13.390.511
3q9aH4BNitric oxide synthase, brain1.14.13.390.510
3ej8H4BNitric oxide synthase, inducible1.14.13.390.509
3ufpH4WNitric oxide synthase, brain1.14.13.390.509
3jt3H4BNitric oxide synthase, brain1.14.13.390.508
5agpH4BNitric oxide synthase, brain1.14.13.390.507
3e6oH4BNitric oxide synthase, inducible1.14.13.390.506
3n60XFNNitric oxide synthase, brain1.14.13.390.506
3nlpJSSNitric oxide synthase, brain1.14.13.390.506
3jt6H4BNitric oxide synthase, brain1.14.13.390.503
1rs6DP2Nitric oxide synthase, brain1.14.13.390.502
3jt4H4BNitric oxide synthase, brain1.14.13.390.502
3n5vXFHNitric oxide synthase, brain1.14.13.390.502
3tym08RNitric oxide synthase, brain1.14.13.390.498
1qomH4BNitric oxide synthase, inducible1.14.13.390.497
2hx44HXNitric oxide synthase, brain1.14.13.390.497
1zzqDP9Nitric oxide synthase, brain1.14.13.390.495
3n66XFNNitric oxide synthase, brain1.14.13.390.495
2nodH4BNitric oxide synthase, inducible1.14.13.390.494
3jt5H4BNitric oxide synthase, brain1.14.13.390.492
1m8eH4BNitric oxide synthase, inducible1.14.13.390.489
3ufsHW6Nitric oxide synthase, brain1.14.13.390.489
3b3pJI7Nitric oxide synthase, brain1.14.13.390.487
3nnz59WNitric oxide synthase, brain1.14.13.390.487
3jt9H4BNitric oxide synthase, brain1.14.13.390.485
3jwuJ11Nitric oxide synthase, brain1.14.13.390.483
3n5yXFLNitric oxide synthase, brain1.14.13.390.481
3n5zXFMNitric oxide synthase, brain1.14.13.390.481
3n61XFJNitric oxide synthase, brain1.14.13.390.481
3nlkJSSNitric oxide synthase, brain1.14.13.390.481
3jt8H4BNitric oxide synthase, brain1.14.13.390.479
4imu1ETNitric oxide synthase, brain1.14.13.390.479
1zzuDP1Nitric oxide synthase, brain1.14.13.390.477
3jx4J11Nitric oxide synthase, brain1.14.13.390.477
3uftHW7Nitric oxide synthase, brain1.14.13.390.477
4jsjQJ7Nitric oxide synthase, brain1.14.13.390.474
1zvlH4BNitric oxide synthase, brain1.14.13.390.472
3nloJSRNitric oxide synthase, brain1.14.13.390.470
3b3oJI3Nitric oxide synthase, brain1.14.13.390.468
4d1oH4BNitric oxide synthase, endothelial1.14.13.390.468
4k5e1Q7Nitric oxide synthase, brain1.14.13.390.468
1zzrDP9Nitric oxide synthase, brain1.14.13.390.467
3e67H4BNitric oxide synthase, inducible1.14.13.390.463
3nlrJRSNitric oxide synthase, brain1.14.13.390.461
4k5fQ14Nitric oxide synthase, brain1.14.13.390.461
1vafH4BNitric oxide synthase, inducible1.14.13.390.457
1dwxH4BNitric oxide synthase, inducible1.14.13.390.455
3hsnH4BNitric oxide synthase, brain1.14.13.390.455
1p6jDP9Nitric oxide synthase, brain1.14.13.390.453
3nosH4BNitric oxide synthase, endothelial1.14.13.390.453
3e7tB14Nitric oxide synthase, inducible1.14.13.390.452
2y37H4BNitric oxide synthase, inducible1.14.13.390.444
3nodH4BNitric oxide synthase, inducible1.14.13.390.441
1m8iH4BNitric oxide synthase, inducible1.14.13.390.440