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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3qqlX03Cyclin-dependent kinase 22.7.11.22

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3qqlX03Cyclin-dependent kinase 22.7.11.221.000
3r83Z14Cyclin-dependent kinase 22.7.11.220.558
1oirHDYCyclin-dependent kinase 22.7.11.220.537
3lfqA28Cyclin-dependent kinase 22.7.11.220.520
2c6o4SPCyclin-dependent kinase 22.7.11.220.513
3r7yZ04Cyclin-dependent kinase 22.7.11.220.508
1w8cN69Cyclin-dependent kinase 22.7.11.220.506
3iggEFQCyclin-dependent kinase 22.7.11.220.499
3qwjX6ACyclin-dependent kinase 22.7.11.220.499
3r8lZ30Cyclin-dependent kinase 22.7.11.220.499
3rpo24ZCyclin-dependent kinase 22.7.11.220.495
2a0cCK9Cyclin-dependent kinase 22.7.11.220.494
3lfnA27Cyclin-dependent kinase 22.7.11.220.494
3r1yX76Cyclin-dependent kinase 22.7.11.220.491
4kd11QKCyclin-dependent kinase 22.7.11.220.491
3qzgX67Cyclin-dependent kinase 22.7.11.220.490
3r8vZ62Cyclin-dependent kinase 22.7.11.220.489
4fki09KCyclin-dependent kinase 22.7.11.220.488
4ek610KCyclin-dependent kinase 22.7.11.220.486
4fklCK2Cyclin-dependent kinase 22.7.11.220.486
3rm618ZCyclin-dependent kinase 22.7.11.220.484
3rahO1ZCyclin-dependent kinase 22.7.11.220.478
2a4lRRCCyclin-dependent kinase 22.7.11.220.477
3lfsA07Cyclin-dependent kinase 22.7.11.220.476
1pxmCK5Cyclin-dependent kinase 22.7.11.220.474
1ykr628Cyclin-dependent kinase 22.7.11.220.472
1ke5LS1Cyclin-dependent kinase 22.7.11.220.467
2b53D23Cyclin-dependent kinase 22.7.11.220.464
3wblPDYCyclin-dependent kinase 22.7.11.220.464
1oitHDTCyclin-dependent kinase 22.7.11.220.463
1y8yCT7Cyclin-dependent kinase 22.7.11.220.462
2exmZIPCyclin-dependent kinase 22.7.11.220.460
4fkt48KCyclin-dependent kinase 22.7.11.220.460
2r3r6SCCyclin-dependent kinase 22.7.11.220.459
3r7vZ02Cyclin-dependent kinase 22.7.11.220.459
3s2pPMUCyclin-dependent kinase 22.7.11.220.458
2btsU32Cyclin-dependent kinase 22.7.11.220.457
2btrU73Cyclin-dependent kinase 22.7.11.220.456
1pxoCK7Cyclin-dependent kinase 22.7.11.220.455
2vu3LZECyclin-dependent kinase 22.7.11.220.455
3r8pZ46Cyclin-dependent kinase 22.7.11.220.454
3qtrX36Cyclin-dependent kinase 22.7.11.220.453
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.451
1y91CT9Cyclin-dependent kinase 22.7.11.220.450
4fkpLS5Cyclin-dependent kinase 22.7.11.220.449
3r7uX96Cyclin-dependent kinase 22.7.11.220.448
2vthLZ2Cyclin-dependent kinase 22.7.11.220.447
4ek816KCyclin-dependent kinase 22.7.11.220.446
3rkb12ZCyclin-dependent kinase 22.7.11.220.445
4fkq42KCyclin-dependent kinase 22.7.11.220.445
1aq1STUCyclin-dependent kinase 22.7.11.220.442
2c6kDT2Cyclin-dependent kinase 22.7.11.220.441