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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3oiaA31Camphor 5-monooxygenase1.14.15.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity
Align
3oiaA31Camphor 5-monooxygenase1.14.15.11.000
3p6pA6BCamphor 5-monooxygenase1.14.15.10.635
1lwlDSOCamphor 5-monooxygenase1.14.15.10.603
4a84DXCMajor pollen allergen Bet v 1-A/0.474
1iolESTEstradiol 17-beta-dehydrogenase 11.1.1.620.471
2hrcCHDFerrochelatase, mitochondrial4.99.1.10.466
4a81DXCMajor pollen allergen Bet v 1-A/0.466
2b37NADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.462
2qd4CHDFerrochelatase, mitochondrial4.99.1.10.458
3pqbVGPPutative oxidoreductase/0.458
4a86H35Major pollen allergen Bet v 1-A/0.456
4req5ADMethylmalonyl-CoA mutase large subunit5.4.99.20.456
4a87NARMajor pollen allergen Bet v 1-A/0.455
1siqFADGlutaryl-CoA dehydrogenase, mitochondrial1.3.8.60.454
2uxoTACHTH-type transcriptional regulator TtgR/0.453
2znnS44Peroxisome proliferator-activated receptor alpha/0.453
3g4gD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.452
3r3b4CO4-hydroxybenzoyl-CoA thioesterase3.1.2.230.452
3rukAERSteroid 17-alpha-hydroxylase/17,20 lyase/0.452
2ci01CMLanosterol 14-alpha demethylase1.14.13.700.448
3flkNAITartrate dehydrogenase/decarboxylase1.1.1.930.448
3t3r9PLCytochrome P450 2A61.14.130.448
4a802ANMajor pollen allergen Bet v 1-A/0.448
4a862ANMajor pollen allergen Bet v 1-A/0.448
4ure1PSCyclohexanol dehydrogenase/0.448
1fm4DXCMajor pollen allergen Bet v 1-L/0.447
4eji0QACytochrome P450 2A131.14.14.10.447
3oqkS52Renin3.4.23.150.446
1oc1ASVIsopenicillin N synthase1.21.3.10.445
1x1cSAHC-20 methyltransferase/0.445
1s0xC3SNuclear receptor ROR-alpha/0.444
3zw9NADPeroxisomal bifunctional enzyme1.1.1.350.444
4a8v2ANMajor pollen allergen Bet v 1-J/0.444
4f4dCHDFerrochelatase, mitochondrial4.99.1.10.444
4a83DXCMajor pollen allergen Bet v 1-A/0.443
4nbwNADShort-chain dehydrogenase/reductase SDR/0.443
2cf6NAPCinnamyl alcohol dehydrogenase 51.1.1.1950.442
2znq401Peroxisome proliferator-activated receptor delta/0.442
3wv9FEGHmd co-occurring protein HcgE/0.442
4nbb9CATerminal oxygenase component of carbazole/0.441
2bxqIMNSerum albumin/0.440