Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3oia | A31 | Camphor 5-monooxygenase | 1.14.15.1 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
3oia | A31 | Camphor 5-monooxygenase | 1.14.15.1 | 1.000 | |
3p6p | A6B | Camphor 5-monooxygenase | 1.14.15.1 | 0.635 | |
1lwl | DSO | Camphor 5-monooxygenase | 1.14.15.1 | 0.603 | |
4a84 | DXC | Major pollen allergen Bet v 1-A | / | 0.474 | |
1iol | EST | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.471 | |
2hrc | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.466 | |
4a81 | DXC | Major pollen allergen Bet v 1-A | / | 0.466 | |
2b37 | NAD | Enoyl-[acyl-carrier-protein] reductase [NADH] | 1.3.1.9 | 0.462 | |
2qd4 | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.458 | |
3pqb | VGP | Putative oxidoreductase | / | 0.458 | |
4a86 | H35 | Major pollen allergen Bet v 1-A | / | 0.456 | |
4req | 5AD | Methylmalonyl-CoA mutase large subunit | 5.4.99.2 | 0.456 | |
4a87 | NAR | Major pollen allergen Bet v 1-A | / | 0.455 | |
1siq | FAD | Glutaryl-CoA dehydrogenase, mitochondrial | 1.3.8.6 | 0.454 | |
2uxo | TAC | HTH-type transcriptional regulator TtgR | / | 0.453 | |
2znn | S44 | Peroxisome proliferator-activated receptor alpha | / | 0.453 | |
3g4g | D71 | cAMP-specific 3',5'-cyclic phosphodiesterase 4D | 3.1.4.53 | 0.452 | |
3r3b | 4CO | 4-hydroxybenzoyl-CoA thioesterase | 3.1.2.23 | 0.452 | |
3ruk | AER | Steroid 17-alpha-hydroxylase/17,20 lyase | / | 0.452 | |
2ci0 | 1CM | Lanosterol 14-alpha demethylase | 1.14.13.70 | 0.448 | |
3flk | NAI | Tartrate dehydrogenase/decarboxylase | 1.1.1.93 | 0.448 | |
3t3r | 9PL | Cytochrome P450 2A6 | 1.14.13 | 0.448 | |
4a80 | 2AN | Major pollen allergen Bet v 1-A | / | 0.448 | |
4a86 | 2AN | Major pollen allergen Bet v 1-A | / | 0.448 | |
4ure | 1PS | Cyclohexanol dehydrogenase | / | 0.448 | |
1fm4 | DXC | Major pollen allergen Bet v 1-L | / | 0.447 | |
4eji | 0QA | Cytochrome P450 2A13 | 1.14.14.1 | 0.447 | |
3oqk | S52 | Renin | 3.4.23.15 | 0.446 | |
1oc1 | ASV | Isopenicillin N synthase | 1.21.3.1 | 0.445 | |
1x1c | SAH | C-20 methyltransferase | / | 0.445 | |
1s0x | C3S | Nuclear receptor ROR-alpha | / | 0.444 | |
3zw9 | NAD | Peroxisomal bifunctional enzyme | 1.1.1.35 | 0.444 | |
4a8v | 2AN | Major pollen allergen Bet v 1-J | / | 0.444 | |
4f4d | CHD | Ferrochelatase, mitochondrial | 4.99.1.1 | 0.444 | |
4a83 | DXC | Major pollen allergen Bet v 1-A | / | 0.443 | |
4nbw | NAD | Short-chain dehydrogenase/reductase SDR | / | 0.443 | |
2cf6 | NAP | Cinnamyl alcohol dehydrogenase 5 | 1.1.1.195 | 0.442 | |
2znq | 401 | Peroxisome proliferator-activated receptor delta | / | 0.442 | |
3wv9 | FEG | Hmd co-occurring protein HcgE | / | 0.442 | |
4nbb | 9CA | Terminal oxygenase component of carbazole | / | 0.441 | |
2bxq | IMN | Serum albumin | / | 0.440 |