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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3cosNADAlcohol dehydrogenase 41.1.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3cosNADAlcohol dehydrogenase 41.1.1.11.000
3jv7NADSecondary alcohol dehydrogenase/0.484
4rquNADAlcohol dehydrogenase class-P/0.483
1hetNADAlcohol dehydrogenase E chain1.1.1.10.476
1mp0NADAlcohol dehydrogenase class-31.1.1.10.475
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.469
1e3lNADAlcohol dehydrogenase 41.1.1.10.468
1e3eNAIAlcohol dehydrogenase 41.1.1.10.464
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.459
4jjiNADAlcohol dehydrogenase class-3/0.455
1ma0NADAlcohol dehydrogenase class-31.1.1.10.452
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.452
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.452
2fzwNADAlcohol dehydrogenase class-31.1.1.10.451
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.451
2fzeAPRAlcohol dehydrogenase class-31.1.1.10.450
4c4oNADSADH/0.447
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.447
5cdgNAJAlcohol dehydrogenase E chain1.1.1.10.446
2xaaNADSecondary alcohol dehydrogenase/0.441
3oq6NAJAlcohol dehydrogenase E chain1.1.1.10.441