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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2uvyGVIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2uvyGVIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
3l9mL9McAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.594
2jdvL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.553
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.490
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.480
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.478
2uzwSS4cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.476
2uw4L15cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.475
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.475
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.474
2uw6GVOcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.471
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.468
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.459
2gnfY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.458
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.452
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.451
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
1stcSTUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.446
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.446
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442
4c34STUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.441
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440