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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2acsNAPAldose reductase1.1.1.21

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2acsNAPAldose reductase1.1.1.211.000
2iq0NAPAldose reductase1.1.1.210.780
1x96NAPAldose reductase1.1.1.210.769
1x98NAPAldose reductase1.1.1.210.752
2acqNAPAldose reductase1.1.1.210.659
2j8tNAPAldose reductase1.1.1.210.641
2acuNAPAldose reductase1.1.1.210.615
1z8aNAPAldose reductase1.1.1.210.606
3v36NAPAldose reductase1.1.1.210.593
1adsNAPAldose reductase1.1.1.210.592
3q65NAPAldose reductase1.1.1.210.581
3q67NAPAldose reductase1.1.1.210.575
1ah4NAPAldose reductase1.1.1.210.565
2pfhNDPAldose reductase1.1.1.210.544
2pf8NDPAldose reductase1.1.1.210.540
2pevNDPAldose reductase1.1.1.210.533
3h7uNAPNADPH-dependent aldo-keto reductase, chloroplastic/0.517
3o3rNAPAldose reductase-related protein 11.1.1.210.505
1az2NAPAldose reductase1.1.1.210.497
3qkzNAPAldose reductase-related protein 11.1.1.210.488
4g5dNDPProstaglandin F synthase1.1.1.1880.479
3h7rNAPAldo-keto reductase family 4 member C8/0.469
4xo7NAPAldo-keto reductase family 1 member C2/0.468
3g1rNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.466
1q5mNDPProstaglandin-E(2) 9-reductase1.1.1.1890.460
2hdjNDPAldo-keto reductase family 1 member C2/0.454
3dopNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.451
1k8cNAPNAD(P)H-dependent D-xylose reductase1.1.1.3070.442