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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1zw1TN5Enoyl-ACP reductase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1zw1TN5Enoyl-ACP reductase/1.000
1nnuTCTEnoyl-ACP reductase/0.543
1zsnTN2Enoyl-ACP reductase/0.524
1zxlJP1Enoyl-ACP reductase/0.520
3lt0FT1Enoyl-ACP reductase/0.519
3lt1FT2Enoyl-ACP reductase/0.516
1nhwTCCEnoyl-ACP reductase/0.512
1nhgTCLEnoyl-ACP reductase/0.499
3lt2FT3Enoyl-ACP reductase/0.498
2nq8ZIDEnoyl-ACP reductase/0.482
2o2yTCLEnoyl-ACP reductase/0.477
3nj8NJ8Enoyl-acyl carrier reductase/0.477
2o2sTCLEnoyl-acyl carrier reductase/0.465
3f4bTCLEnoyl-acyl carrier protein reductase/0.452
1vrwNAIEnoyl-ACP reductase/0.447
1uh5TCLEnoyl-ACP reductase/0.442
3lsyFT0Enoyl-ACP reductase/0.440