Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1tf7ATPCircadian clock protein kinase KaiC2.7.11.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1tf7ATPCircadian clock protein kinase KaiC2.7.11.11.000
1u9iATPCircadian clock protein kinase KaiC2.7.11.10.989
2gblATPCircadian clock protein kinase KaiC2.7.11.10.589
3dvlATPCircadian clock protein kinase KaiC2.7.11.10.582
3s1aATPCircadian clock protein kinase KaiC2.7.11.10.579
3jzmATPCircadian clock protein kinase KaiC2.7.11.10.551
4tl9AGSCircadian clock protein kinase KaiC2.7.11.10.519
4o0mATPCircadian clock protein kinase KaiC2.7.11.10.518
4tldAGSCircadian clock protein kinase KaiC2.7.11.10.518
4tlbAGSCircadian clock protein kinase KaiC2.7.11.10.517
4tl7ATPCircadian clock protein kinase KaiC2.7.11.10.515
4tlcAGSCircadian clock protein kinase KaiC2.7.11.10.495
4tleAGSCircadian clock protein kinase KaiC2.7.11.10.495
4tl8AGSCircadian clock protein kinase KaiC2.7.11.10.476
4tl6ANPCircadian clock protein kinase KaiC2.7.11.10.460
4tlaADPCircadian clock protein kinase KaiC2.7.11.10.460