Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1oiqHDUCyclin-dependent kinase 22.7.11.22

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1oiqHDUCyclin-dependent kinase 22.7.11.221.000
1v1k3FPCyclin-dependent kinase 22.7.11.220.617
1gih1PUCyclin-dependent kinase 22.7.11.220.555
3r9dX6BCyclin-dependent kinase 22.7.11.220.536
1p2a5BNCyclin-dependent kinase 22.7.11.220.520
2w05FRTCyclin-dependent kinase 22.7.11.220.518
2j9mPY8Cyclin-dependent kinase 22.7.11.220.508
2uznC96Cyclin-dependent kinase 22.7.11.220.506
3r7iX9ICyclin-dependent kinase 22.7.11.220.502
3lfsA07Cyclin-dependent kinase 22.7.11.220.501
2fvdLIACyclin-dependent kinase 22.7.11.220.497
3rkb12ZCyclin-dependent kinase 22.7.11.220.497
3lfqA28Cyclin-dependent kinase 22.7.11.220.490
2btrU73Cyclin-dependent kinase 22.7.11.220.486
4erwSTUCyclin-dependent kinase 22.7.11.220.486
3qxpX64Cyclin-dependent kinase 22.7.11.220.485
3qxoX65Cyclin-dependent kinase 22.7.11.220.482
2r64740Cyclin-dependent kinase 22.7.11.220.481
3qwjX6ACyclin-dependent kinase 22.7.11.220.479
3r8zZ63Cyclin-dependent kinase 22.7.11.220.467
3le62BZCyclin-dependent kinase 22.7.11.220.466
3rm719ZCyclin-dependent kinase 22.7.11.220.466
1urwI1PCyclin-dependent kinase 22.7.11.220.464
2w1hL0FCyclin-dependent kinase 22.7.11.220.464
1oitHDTCyclin-dependent kinase 22.7.11.220.462
3roy22ZCyclin-dependent kinase 22.7.11.220.462
1ke6LS2Cyclin-dependent kinase 22.7.11.220.460
2b55D31Cyclin-dependent kinase 22.7.11.220.456
3uli1N3Cyclin-dependent kinase 22.7.11.220.455
3sqq99ZCyclin-dependent kinase 22.7.11.220.453
1aq1STUCyclin-dependent kinase 22.7.11.220.449
3ezvEZVCyclin-dependent kinase 22.7.11.220.449
3qqkX02Cyclin-dependent kinase 22.7.11.220.448
3qqfX07Cyclin-dependent kinase 22.7.11.220.447
1pxmCK5Cyclin-dependent kinase 22.7.11.220.446
2bheBRYCyclin-dependent kinase 22.7.11.220.445