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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1mmvH4BNitric oxide synthase, brain1.14.13.39

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1mmvH4BNitric oxide synthase, brain1.14.13.391.000
4fvxH4BNitric oxide synthase, brain1.14.13.390.785
2g6iHBINitric oxide synthase, brain1.14.13.390.743
3b3pH4BNitric oxide synthase, brain1.14.13.390.733
3jt7H4BNitric oxide synthase, brain1.14.13.390.726
2hx4H4BNitric oxide synthase, brain1.14.13.390.725
1rs6H4BNitric oxide synthase, brain1.14.13.390.712
1p6kH4BNitric oxide synthase, brain1.14.13.390.710
1m00H4BNitric oxide synthase, brain1.14.13.390.703
1zzrH4BNitric oxide synthase, brain1.14.13.390.698
4jsiH4BNitric oxide synthase, brain1.14.13.390.689
1rs7H4BNitric oxide synthase, brain1.14.13.390.681
3b3mH4BNitric oxide synthase, brain1.14.13.390.677
3b3nH4BNitric oxide synthase, brain1.14.13.390.675
4cx3H4BNitric oxide synthase, brain1.14.13.390.674
3fc5H4BNitric oxide synthase, brain1.14.13.390.671
3nnzH4BNitric oxide synthase, brain1.14.13.390.670
3b3oH4BNitric oxide synthase, brain1.14.13.390.667
3ufuH4BNitric oxide synthase, brain1.14.13.390.663
4fvyH4BNitric oxide synthase, brain1.14.13.390.659
4fw0H4BNitric oxide synthase, brain1.14.13.390.658
3jt5H4BNitric oxide synthase, brain1.14.13.390.652
1p6jH4BNitric oxide synthase, brain1.14.13.390.647
3pnfH4BNitric oxide synthase, brain1.14.13.390.644
5agkH4BNitric oxide synthase, brain1.14.13.390.641
1k2uH4BNitric oxide synthase, brain1.14.13.390.639
3jwvH4BNitric oxide synthase, brain1.14.13.390.633
3jx2H4BNitric oxide synthase, brain1.14.13.390.632
3rqjH4BNitric oxide synthase, brain1.14.13.390.630
3nljH4BNitric oxide synthase, brain1.14.13.390.628
3jt4H4BNitric oxide synthase, brain1.14.13.390.627
1k2tH4BNitric oxide synthase, brain1.14.13.390.626
4luxH4BNitric oxide synthase, brain1.14.13.390.625
3jt9H4BNitric oxide synthase, brain1.14.13.390.623
3q9aH4BNitric oxide synthase, brain1.14.13.390.623
3jt3H4BNitric oxide synthase, brain1.14.13.390.622
1om5H4BNitric oxide synthase, brain1.14.13.390.620
3nlzH4BNitric oxide synthase, brain1.14.13.390.616
3ufqH4BNitric oxide synthase, brain1.14.13.390.615
3jt6H4BNitric oxide synthase, brain1.14.13.390.614
3jtaH4BNitric oxide synthase, brain1.14.13.390.614
3nlpH4BNitric oxide synthase, brain1.14.13.390.613
4fvzH4BNitric oxide synthase, brain1.14.13.390.612
3tylH4BNitric oxide synthase, brain1.14.13.390.610
3q99H4BNitric oxide synthase, brain1.14.13.390.601
3nlnH4BNitric oxide synthase, brain1.14.13.390.599
3jt8H4BNitric oxide synthase, brain1.14.13.390.598
3b3pJI7Nitric oxide synthase, brain1.14.13.390.596
5aglH4BNitric oxide synthase, brain1.14.13.390.596
5agpH4BNitric oxide synthase, brain1.14.13.390.596
3n5yH4BNitric oxide synthase, brain1.14.13.390.595
4k5dH4BNitric oxide synthase, brain1.14.13.390.589
4k5eH4BNitric oxide synthase, brain1.14.13.390.588
3jwtH4BNitric oxide synthase, brain1.14.13.390.586
3jx5H4BNitric oxide synthase, brain1.14.13.390.586
2g6j7APNitric oxide synthase, brain1.14.13.390.579
1zzqH4BNitric oxide synthase, brain1.14.13.390.577
3nlvH4BNitric oxide synthase, brain1.14.13.390.576
3hsnH4BNitric oxide synthase, brain1.14.13.390.574
3n62XFJNitric oxide synthase, brain1.14.13.390.574
3jwuH4BNitric oxide synthase, brain1.14.13.390.573
3dqrH4BNitric oxide synthase, brain1.14.13.390.568
3n5zH4BNitric oxide synthase, brain1.14.13.390.566
3nlwH4BNitric oxide synthase, brain1.14.13.390.563
1rs6DP2Nitric oxide synthase, brain1.14.13.390.562
4gqeH4BNitric oxide synthase, brain1.14.13.390.562
4imuH4BNitric oxide synthase, brain1.14.13.390.560
4jsgH4BNitric oxide synthase, brain1.14.13.390.560
3rqmH4BNitric oxide synthase, brain1.14.13.390.559
3tymH4BNitric oxide synthase, brain1.14.13.390.559
3tym08RNitric oxide synthase, brain1.14.13.390.558
3ufoH4BNitric oxide synthase, brain1.14.13.390.558
1zzuH4BNitric oxide synthase, brain1.14.13.390.555
4imtH4BNitric oxide synthase, brain1.14.13.390.554
3ufvH4BNitric oxide synthase, brain1.14.13.390.553
3nlkH4BNitric oxide synthase, brain1.14.13.390.552
3nloH4BNitric oxide synthase, brain1.14.13.390.552
2hx3H4BNitric oxide synthase, brain1.14.13.390.550
3nlrJRSNitric oxide synthase, brain1.14.13.390.550
1zvlH4BNitric oxide synthase, brain1.14.13.390.549
3jx2JI4Nitric oxide synthase, brain1.14.13.390.549
3ufoHW4Nitric oxide synthase, brain1.14.13.390.546
4cx3HW8Nitric oxide synthase, brain1.14.13.390.544
3ufrH4BNitric oxide synthase, brain1.14.13.390.543
4euxH4BNitric oxide synthase, brain1.14.13.390.542
3n65XFJNitric oxide synthase, brain1.14.13.390.541
3nnyH4BNitric oxide synthase, brain1.14.13.390.540
3rqkH4BNitric oxide synthase, brain1.14.13.390.537
4jsfH4BNitric oxide synthase, brain1.14.13.390.537
3pneH4BNitric oxide synthase, brain1.14.13.390.536
3n66XFNNitric oxide synthase, brain1.14.13.390.535
4d1oH4BNitric oxide synthase, endothelial1.14.13.390.534
4cx5H4BNitric oxide synthase, brain1.14.13.390.533
3nosH4BNitric oxide synthase, endothelial1.14.13.390.532
3n5vH4BNitric oxide synthase, brain1.14.13.390.531
4jseH4BNitric oxide synthase, brain1.14.13.390.530
3n63XFNNitric oxide synthase, brain1.14.13.390.529
3ufsH4BNitric oxide synthase, brain1.14.13.390.529
3ufuHW8Nitric oxide synthase, brain1.14.13.390.529
1p6jDP9Nitric oxide synthase, brain1.14.13.390.525
3n60XFNNitric oxide synthase, brain1.14.13.390.525
4k5fH4BNitric oxide synthase, brain1.14.13.390.525
4k5d1Q6Nitric oxide synthase, brain1.14.13.390.523
4k5gH4BNitric oxide synthase, brain1.14.13.390.523
4cx4H4BNitric oxide synthase, brain1.14.13.390.522
3nlrH4BNitric oxide synthase, brain1.14.13.390.521
3jx0JI4Nitric oxide synthase, brain1.14.13.390.520
3rqlH4BNitric oxide synthase, brain1.14.13.390.520
4jshH4BNitric oxide synthase, brain1.14.13.390.519
3n5wXFJNitric oxide synthase, brain1.14.13.390.518
3nlyH4BNitric oxide synthase, brain1.14.13.390.518
3pnf8BXNitric oxide synthase, brain1.14.13.390.518
4imwH4BNitric oxide synthase, brain1.14.13.390.518
3n61H4BNitric oxide synthase, brain1.14.13.390.517
3nlqH4BNitric oxide synthase, brain1.14.13.390.517
1r35H4BNitric oxide synthase, inducible1.14.13.390.515
4k5gQ13Nitric oxide synthase, brain1.14.13.390.512
3jwsJI4Nitric oxide synthase, brain1.14.13.390.511
3ufpH4BNitric oxide synthase, brain1.14.13.390.509
1dwxH4BNitric oxide synthase, inducible1.14.13.390.507
3e7gH4BNitric oxide synthase, inducible1.14.13.390.506
3dwjH4BNitric oxide synthase, inducible1.14.13.390.505
4luxQJ8Nitric oxide synthase, brain1.14.13.390.505
3e6tH4BNitric oxide synthase, inducible1.14.13.390.504
3nlpJSSNitric oxide synthase, brain1.14.13.390.504
3ej8H4BNitric oxide synthase, inducible1.14.13.390.503
3nljJRRNitric oxide synthase, brain1.14.13.390.503
3nlw3XFNitric oxide synthase, brain1.14.13.390.503
3tylAXWNitric oxide synthase, brain1.14.13.390.503
3svqH4BNitric oxide synthase, brain1.14.13.390.502
3uftH4BNitric oxide synthase, brain1.14.13.390.502
3nlz3XDNitric oxide synthase, brain1.14.13.390.501
3ufwH4BNitric oxide synthase, brain1.14.13.390.501
3nodH4BNitric oxide synthase, inducible1.14.13.390.500
3jx6H4BNitric oxide synthase, brain1.14.13.390.499
3nlnJRSNitric oxide synthase, brain1.14.13.390.497
3pngH4BNitric oxide synthase, brain1.14.13.390.496
3ufqHW5Nitric oxide synthase, brain1.14.13.390.496
3nlv3XANitric oxide synthase, brain1.14.13.390.493
3nnz59WNitric oxide synthase, brain1.14.13.390.492
4jsiQ05Nitric oxide synthase, brain1.14.13.390.492
3jwtJI5Nitric oxide synthase, brain1.14.13.390.491
3n5xXFKNitric oxide synthase, brain1.14.13.390.491
2hx44HXNitric oxide synthase, brain1.14.13.390.488
3jwuJ11Nitric oxide synthase, brain1.14.13.390.488
3jx3H4BNitric oxide synthase, brain1.14.13.390.487
4cx5HW8Nitric oxide synthase, brain1.14.13.390.487
1zzqDP9Nitric oxide synthase, brain1.14.13.390.486
3nw2H4BNitric oxide synthase, inducible1.14.13.390.485
3svpH4BNitric oxide synthase, brain1.14.13.390.483
1zzrDP9Nitric oxide synthase, brain1.14.13.390.482
3e6oH4BNitric oxide synthase, inducible1.14.13.390.481
3nloJSRNitric oxide synthase, brain1.14.13.390.481
4jsgQ10Nitric oxide synthase, brain1.14.13.390.480
3n5yXFLNitric oxide synthase, brain1.14.13.390.479
1zzuDP1Nitric oxide synthase, brain1.14.13.390.475
3nlkJSSNitric oxide synthase, brain1.14.13.390.474
3jx5J14Nitric oxide synthase, brain1.14.13.390.473
3n5vXFHNitric oxide synthase, brain1.14.13.390.473
3rqlX2DNitric oxide synthase, brain1.14.13.390.472
3jx4H4BNitric oxide synthase, brain1.14.13.390.471
1qomH4BNitric oxide synthase, inducible1.14.13.390.470
2nodH4BNitric oxide synthase, inducible1.14.13.390.470
1m8eH4BNitric oxide synthase, inducible1.14.13.390.468
3b3oJI3Nitric oxide synthase, brain1.14.13.390.468
4k5fQ14Nitric oxide synthase, brain1.14.13.390.467
3n5zXFMNitric oxide synthase, brain1.14.13.390.466
4k5e1Q7Nitric oxide synthase, brain1.14.13.390.465
3e67H4BNitric oxide synthase, inducible1.14.13.390.462
4imu1ETNitric oxide synthase, brain1.14.13.390.461
3jx6JI5Nitric oxide synthase, brain1.14.13.390.459
3rqjY2BNitric oxide synthase, brain1.14.13.390.459
4imt1EWNitric oxide synthase, brain1.14.13.390.459
4euxHW1Nitric oxide synthase, brain1.14.13.390.458
3ufvHW9Nitric oxide synthase, brain1.14.13.390.457
3ufrH5WNitric oxide synthase, brain1.14.13.390.453
4cx4HW9Nitric oxide synthase, brain1.14.13.390.449
1m9tH4BNitric oxide synthase, inducible1.14.13.390.444
3ufwHW0Nitric oxide synthase, brain1.14.13.390.444
4jsfQJ4Nitric oxide synthase, brain1.14.13.390.444
3n61XFJNitric oxide synthase, brain1.14.13.390.442
3pne8AXNitric oxide synthase, brain1.14.13.390.442
3rqmX2ENitric oxide synthase, brain1.14.13.390.441
4imw1EVNitric oxide synthase, brain1.14.13.390.441