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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1axeNADAlcohol dehydrogenase E chain1.1.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1axeNADAlcohol dehydrogenase E chain1.1.1.11.000
1a71NADAlcohol dehydrogenase E chain1.1.1.10.740
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.614
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.600
1mgoNADAlcohol dehydrogenase E chain1.1.1.10.596
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.582
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.581
1adcPADAlcohol dehydrogenase E chain1.1.1.10.571
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.561
5cdsNAJAlcohol dehydrogenase E chain1.1.1.10.543
1hldNADAlcohol dehydrogenase E chain1.1.1.10.524
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.520
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.517
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.514
1axgNADAlcohol dehydrogenase E chain1.1.1.10.510
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.509
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.506
1hszNADAlcohol dehydrogenase 1B1.1.1.10.505
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.501
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.483
5kjfNAJAlcohol dehydrogenase E chain1.1.1.10.471
1hdzNADAlcohol dehydrogenase 1B1.1.1.10.469
3ukoNADAlcohol dehydrogenase class-3/0.460
4c4oNADSADH/0.449
1ma0NADAlcohol dehydrogenase class-31.1.1.10.445
4cpdNADAlcohol dehydrogenase/0.443