scPDB - Distribution of Binding site Similarity values of 6tmn entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
6tmn	0PI	Thermolysin	3.4.24.27

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
6tmn	0PI	Thermolysin	3.4.24.27	1.000
4tmn	0PK	Thermolysin	3.4.24.27	0.776
2tmn	0FA	Thermolysin	3.4.24.27	0.727
4h57	0PJ	Thermolysin	3.4.24.27	0.659
4tln	LNO	Thermolysin	3.4.24.27	0.645
3t74	UBY	Thermolysin	3.4.24.27	0.623
3t8d	UBV	Thermolysin	3.4.24.27	0.608
3t8h	UBS	Thermolysin	3.4.24.27	0.597
4d9w	X32	Thermolysin	3.4.24.27	0.591
3t87	UBZ	Thermolysin	3.4.24.27	0.586
3t8c	UBW	Thermolysin	3.4.24.27	0.584
1qf2	TI3	Thermolysin	3.4.24.27	0.513
3fgd	BYA	Thermolysin	3.4.24.27	0.507
3for	ZNP	Thermolysin	3.4.24.27	0.494
4b52	RDF	Bacillolysin	/	0.480
4ca5	3EF	Angiotensin-converting enzyme	3.2.1	0.465
3q43	D66	M1 family aminopeptidase	3.4.11	0.448
3f2p	S3B	Thermolysin	3.4.24.27	0.447
4gh6	LUO	High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A	/	0.444
4ara	C56	Acetylcholinesterase	3.1.1.7	0.443
1q84	TZ4	Acetylcholinesterase	3.1.1.7	0.442
2gyw	OBI	Acetylcholinesterase	3.1.1.7	0.442
4b7z	Q4Q	Acetylcholinesterase	3.1.1.7	0.441
4bxk	1IU	Angiotensin-converting enzyme	3.2.1	0.441