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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4z24FADPutative GMC-type oxidoreductase R1351

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4z24FADPutative GMC-type oxidoreductase R13511.000
4z26FADPutative GMC-type oxidoreductase R13510.637
4qi7FADCellobiose dehydrogenase/0.467
1cf3FADGlucose oxidase1.1.3.40.463
4qi4FADCellobiose dehydrogenase/0.463
2cf6NAPCinnamyl alcohol dehydrogenase 51.1.1.1950.457
2xlrFADPutative flavin-containing monooxygenase/0.456
2y0mACOHistone acetyltransferase KAT8/0.455
4qi5FADCellobiose dehydrogenase/0.452
2cmjNAPIsocitrate dehydrogenase [NADP] cytoplasmic1.1.1.420.442