Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4l82FMNUncharacterized protein

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4l82FMNUncharacterized protein/1.000
3pftFMNFlavin reductase/0.529
5choFADFlavin reductase/0.470
1rz0FADPhenol 2-hydroxylase component B/0.464
1q0zAKAAclacinomycin methylesterase RdmC3.1.1.950.453
3v0p4GWHisto-blood group ABO system transferase/0.451
4dreNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.448
5dp2NAPCurF/0.448
2ifaFMNUncharacterized protein/0.447
3ahn3A1Oligopeptidase/0.447
1lbcCYZGlutamate receptor 2/0.446
2h6iCYS_VAL_LEU_SER_GERProtein farnesyltransferase subunit beta2.5.1.580.446
1bvrNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.445
1kbo340NAD(P)H dehydrogenase [quinone] 11.6.5.20.444
2lfoGCHFatty acid-binding protein, liver/0.442
3mj4URMUDP-galactopyranose mutase/0.442
4bfxZVXPantothenate kinase2.7.1.330.442
2gjlFMNNitronate monooxygenase1.13.12.160.441
3e34ED1Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha/0.441
3e34ED1Protein farnesyltransferase subunit beta2.5.1.580.441
3te5NAI5'-AMP-activated protein kinase subunit gamma/0.441
1fapRAPPeptidyl-prolyl cis-trans isomerase FKBP1A5.2.1.80.440
1fapRAPSerine/threonine-protein kinase mTOR2.7.11.10.440