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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4ips1G4Mycocyclosin synthase1.14.21.9

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4ips1G4Mycocyclosin synthase1.14.21.91.000
4ipw1G7Mycocyclosin synthase1.14.21.90.764
3g5hYTTMycocyclosin synthase1.14.21.90.760
4ict1EDMycocyclosin synthase1.14.21.90.687
4ktl1CQCytochrome P450/0.634
4iq71G9Mycocyclosin synthase1.14.21.90.626
4ktf1TMCytochrome P450/0.593
4ktkKTKCytochrome P450/0.563
4g48PZBMycocyclosin synthase1.14.21.90.509
4g47TZFMycocyclosin synthase1.14.21.90.496
4g2gTDHMycocyclosin synthase1.14.21.90.494
2ij7TPFMycocyclosin synthase1.14.21.90.454