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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4h5tADPHeat shock cognate 71 kDa protein

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
4h5tADPHeat shock cognate 71 kDa protein/1.000
2qwlADPHeat shock cognate 71 kDa protein/0.570
1ngjANPHeat shock cognate 71 kDa protein/0.557
3hscADPHeat shock cognate 71 kDa protein/0.557
1atsADPHeat shock cognate 71 kDa protein/0.534
1ngcADPHeat shock cognate 71 kDa protein/0.527
1ngiANPHeat shock cognate 71 kDa protein/0.517
3ldoANP78 kDa glucose-regulated protein/0.513
2qwnADPHeat shock cognate 71 kDa protein/0.512
1nghATPHeat shock cognate 71 kDa protein/0.507
5f2rACP78 kDa glucose-regulated protein/0.503
1ngeATPHeat shock cognate 71 kDa protein/0.494
1ngbADPHeat shock cognate 71 kDa protein/0.487
2qwqADPHeat shock cognate 71 kDa protein/0.487
1atrADPHeat shock cognate 71 kDa protein/0.475
2qwrANPHeat shock cognate 71 kDa protein/0.472
3fe1ADPHeat shock 70 kDa protein 6/0.468
3fzm3GOHeat shock cognate 71 kDa protein/0.457
5eoxADPType 4 fimbrial biogenesis protein PilM/0.449
4a2bAGSCell division protein FtsA/0.442
4ia3BIVVitamin D3 receptor A/0.440