scPDB - Distribution of Binding site Similarity values of 4gn8 entry / Site 2

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4gn8	ASO	Regucalcin	3.1.1.17

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4gn8	ASO	Regucalcin	3.1.1.17	1.000
4gnc	ASO	Regucalcin	3.1.1.17	0.471
3zgz	84T	Leucine--tRNA ligase	/	0.466
3cow	52H	Pantothenate synthetase	6.3.2.1	0.459
2c1b	CQP	cAMP-dependent protein kinase catalytic subunit alpha	2.7.11.11	0.458
3zxi	TYA	Tyrosine--tRNA ligase, mitochondrial	6.1.1.1	0.455
1f8w	FAD	NADH peroxidase	1.11.1.1	0.451
3ix8	TX3	Transcriptional activator protein LasR	/	0.451
1rdw	LAR	Actin, alpha skeletal muscle	/	0.450
1n2i	PAJ	Pantothenate synthetase	6.3.2.1	0.449
5hg0	SAM	Pantothenate synthetase	/	0.449
4a86	H35	Major pollen allergen Bet v 1-A	/	0.447
3coz	54H	Pantothenate synthetase	6.3.2.1	0.445
4h03	LAR	Actin, alpha skeletal muscle	/	0.445
3ag6	PAJ	Pantothenate synthetase	/	0.444
3phi	NDP	Shikimate dehydrogenase (NADP(+))	/	0.444
3coy	53H	Pantothenate synthetase	6.3.2.1	0.443
2cv2	GSU	Glutamate--tRNA ligase	6.1.1.17	0.442
3em0	CHD	Fatty acid-binding protein 6, ileal (gastrotropin)	/	0.442
2oh0	2PY	cAMP-dependent protein kinase catalytic subunit alpha	2.7.11.11	0.441
1gvt	2ZS	Endothiapepsin	3.4.23.22	0.440
3h3r	14H	Collagen type IV alpha-3-binding protein	/	0.440