Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3tyc | XHP | Dihydropteroate synthase |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
3tyc | XHP | Dihydropteroate synthase | / | 1.000 | |
3h2n | B62 | Dihydropteroate synthase | / | 0.535 | |
3tyd | XHP | Dihydropteroate synthase | / | 0.514 | |
1tww | HH2 | Dihydropteroate synthase | / | 0.480 | |
2dzb | HH2 | Dihydropteroate synthase | / | 0.469 | |
1vrq | FMN | Subunit alpha of sarocosine oxidase | / | 0.466 | |
1vrq | FMN | Subunit beta of sarcosine oxidase | / | 0.466 | |
2y5s | 78H | Dihydropteroate synthase | / | 0.449 | |
3h2c | B58 | Dihydropteroate synthase | / | 0.449 | |
1aj2 | 2PH | Dihydropteroate synthase | / | 0.446 | |
3h24 | B55 | Dihydropteroate synthase | / | 0.443 | |
3muo | ZPR | Prolyl endopeptidase | / | 0.443 | |
4qny | ANP | Mitogen activated protein kinase, putative | / | 0.442 |