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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3r83Z14Cyclin-dependent kinase 22.7.11.22

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3r83Z14Cyclin-dependent kinase 22.7.11.221.000
2a4lRRCCyclin-dependent kinase 22.7.11.220.516
3lfnA27Cyclin-dependent kinase 22.7.11.220.515
1w8cN69Cyclin-dependent kinase 22.7.11.220.504
3rm618ZCyclin-dependent kinase 22.7.11.220.501
3qx2X63Cyclin-dependent kinase 22.7.11.220.498
3r8vZ62Cyclin-dependent kinase 22.7.11.220.498
2w06FRVCyclin-dependent kinase 22.7.11.220.489
3lfqA28Cyclin-dependent kinase 22.7.11.220.487
3rpo24ZCyclin-dependent kinase 22.7.11.220.487
3r7yZ04Cyclin-dependent kinase 22.7.11.220.485
2r64740Cyclin-dependent kinase 22.7.11.220.479
3r9dX6BCyclin-dependent kinase 22.7.11.220.477
2vtpLZ9Cyclin-dependent kinase 22.7.11.220.475
3rahO1ZCyclin-dependent kinase 22.7.11.220.475
1h0w207Cyclin-dependent kinase 22.7.11.220.471
2c6o4SPCyclin-dependent kinase 22.7.11.220.471
1e1xNW1Cyclin-dependent kinase 22.7.11.220.466
2r3gSC9Cyclin-dependent kinase 22.7.11.220.464
1oirHDYCyclin-dependent kinase 22.7.11.220.462
2a0cCK9Cyclin-dependent kinase 22.7.11.220.462
1oitHDTCyclin-dependent kinase 22.7.11.220.461
2b53D23Cyclin-dependent kinase 22.7.11.220.461
2r3iSCFCyclin-dependent kinase 22.7.11.220.457
3pj8404Cyclin-dependent kinase 22.7.11.220.456
3r71X86Cyclin-dependent kinase 22.7.11.220.455
3raiX85Cyclin-dependent kinase 22.7.11.220.455
3le62BZCyclin-dependent kinase 22.7.11.220.454
1g5sI17Cyclin-dependent kinase 22.7.11.220.453
3qqlX03Cyclin-dependent kinase 22.7.11.220.452
3s1h56ZCyclin-dependent kinase 22.7.11.220.452
4fkv61KCyclin-dependent kinase 22.7.11.220.452
2b52D42Cyclin-dependent kinase 22.7.11.220.451
3sqq99ZCyclin-dependent kinase 22.7.11.220.451
1y91CT9Cyclin-dependent kinase 22.7.11.220.450
2c6lDT4Cyclin-dependent kinase 22.7.11.220.450
2r3jSCJCyclin-dependent kinase 22.7.11.220.449
1ke7LS3Cyclin-dependent kinase 22.7.11.220.448
2w05FRTCyclin-dependent kinase 22.7.11.220.447
1aq1STUCyclin-dependent kinase 22.7.11.220.446
2vtoLZ8Cyclin-dependent kinase 22.7.11.220.446
3rk909ZCyclin-dependent kinase 22.7.11.220.445
4ek816KCyclin-dependent kinase 22.7.11.220.445
2vtsLZCCyclin-dependent kinase 22.7.11.220.442
3qtrX36Cyclin-dependent kinase 22.7.11.220.442
4erwSTUCyclin-dependent kinase 22.7.11.220.442
1pxmCK5Cyclin-dependent kinase 22.7.11.220.441
2r3fSC8Cyclin-dependent kinase 22.7.11.220.441
2r3kSCQCyclin-dependent kinase 22.7.11.220.441
2r3lSCWCyclin-dependent kinase 22.7.11.220.441