scPDB - Distribution of Binding site Similarity values of 3ggs entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3ggs	2FD	Purine nucleoside phosphorylase	2.4.2.1

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3ggs	2FD	Purine nucleoside phosphorylase	2.4.2.1	1.000
1lv8	9PP	Purine nucleoside phosphorylase	2.4.2.1	0.483
2a0w	DIH	Purine nucleoside phosphorylase	2.4.2.1	0.468
1v3q	2DI	Purine nucleoside phosphorylase	2.4.2.1	0.467
1rfg	GMP	Purine nucleoside phosphorylase	2.4.2.1	0.465
4bfx	ZVX	Pantothenate kinase	2.7.1.33	0.462
1pwy	AC2	Purine nucleoside phosphorylase	2.4.2.1	0.460
1lvu	9PP	Purine nucleoside phosphorylase	2.4.2.1	0.458
2a0x	DIH	Purine nucleoside phosphorylase	2.4.2.1	0.450
1q20	PLO	Sulfotransferase family cytosolic 2B member 1	2.8.2.2	0.447
3v2u	ATP	Protein GAL3	/	0.445
2a0y	DIH	Purine nucleoside phosphorylase	2.4.2.1	0.444
1rr6	IMH	Purine nucleoside phosphorylase	2.4.2.1	0.442
4nv1	0FX	Formyl transferase	/	0.442
2gev	COK	Pantothenate kinase	2.7.1.33	0.441
2ouu	35G	cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A	3.1.4.17	0.441