scPDB - Distribution of Binding site Similarity values of 3f0g entry / Site 4

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3f0g	C5P	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3f0g	C5P	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	/	1.000
1gx1	CDP	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	4.6.1.12	0.546
3iew	CTP	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	/	0.546
1h48	C5P	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	4.6.1.12	0.524
1iv4	C5P	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	4.6.1.12	0.500
1h47	C5P	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	4.6.1.12	0.497
4c8e	C5P	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	/	0.482
3jvh	HHV	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	/	0.468
3k2x	I5A	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	/	0.456
2cke	IQU	Death-associated protein kinase 2	/	0.454
4c8g	C5P	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	/	0.451
2amt	1AA	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	4.6.1.12	0.444