2.800 Å
X-ray
2006-04-18
Name: | Death-associated protein kinase 2 |
---|---|
ID: | DAPK2_HUMAN |
AC: | Q9UIK4 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 4 % |
B | 96 % |
B-Factor: | 45.724 |
---|---|
Number of residues: | 23 |
Including | |
Standard Amino Acids: | 23 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.069 | 1231.875 |
% Hydrophobic | % Polar |
---|---|
42.19 | 57.81 |
According to VolSite |
HET Code: | IQU |
---|---|
Formula: | C11H14N3O2S |
Molecular weight: | 252.313 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 51.09 % |
Polar Surface area: | 95.07 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 3 |
H-Bond Donors: | 2 |
Rings: | 2 |
Aromatic rings: | 2 |
Anionic atoms: | 0 |
Cationic atoms: | 1 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 4 |
X | Y | Z |
---|---|---|
-11.0042 | 14.0678 | 32.7591 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C9 | CD2 | LEU- 19 | 3.79 | 0 | Hydrophobic |
C2 | CG2 | VAL- 27 | 3.62 | 0 | Hydrophobic |
C5 | CG1 | VAL- 27 | 4.16 | 0 | Hydrophobic |
C1 | CG1 | VAL- 27 | 3.85 | 0 | Hydrophobic |
C5 | CB | ALA- 40 | 4.12 | 0 | Hydrophobic |
C4 | CD1 | ILE- 77 | 3.68 | 0 | Hydrophobic |
C4 | CD1 | LEU- 93 | 4.09 | 0 | Hydrophobic |
N7 | N | VAL- 96 | 2.98 | 144.83 | H-Bond (Protein Donor) |
C9 | CE | MET- 146 | 3.78 | 0 | Hydrophobic |
C2 | CD1 | ILE- 160 | 4.03 | 0 | Hydrophobic |