Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2y0d | UGA | UDP-glucose dehydrogenase |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
2y0d | UGA | UDP-glucose dehydrogenase | / | 1.000 | |
3khu | UPG | UDP-glucose 6-dehydrogenase | 1.1.1.22 | 0.530 | |
2qg4 | UGA | UDP-glucose 6-dehydrogenase | 1.1.1.22 | 0.527 | |
4edf | UPG | UDP-glucose 6-dehydrogenase | 1.1.1.22 | 0.481 | |
3gg2 | UGA | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family | / | 0.461 | |
3ptz | UDX | UDP-glucose 6-dehydrogenase | 1.1.1.22 | 0.455 |