scPDB - Distribution of Binding site Similarity values of 2v18 entry / Site 2

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2v18	FMN	Dodecin

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
2v18	FMN	Dodecin	/	1.000
2vyx	FMN	Dodecin	/	0.687
2v19	FMN	Dodecin	/	0.551
1e79	ATP	ATP synthase subunit alpha, mitochondrial	/	0.460
1e79	ATP	ATP synthase subunit beta, mitochondrial	3.6.3.14	0.460
2vbd	V10	Isopenicillin N synthase	1.21.3.1	0.455
4bfx	ZVX	Pantothenate kinase	2.7.1.33	0.454
2bu9	HFV	Isopenicillin N synthase	1.21.3.1	0.450
1qiq	ACC	Isopenicillin N synthase	1.21.3.1	0.447
2vbp	VB1	Isopenicillin N synthase	1.21.3.1	0.446
4a8v	2AN	Major pollen allergen Bet v 1-J	/	0.446
2uxo	TAC	HTH-type transcriptional regulator TtgR	/	0.445
2vtd	LKM	UDP-N-acetylmuramoylalanine--D-glutamate ligase	6.3.2.9	0.445
4tmc	FMN	Old yellow enzyme	/	0.445
3nhf	VVV	Ribosyldihydronicotinamide dehydrogenase [quinone]	/	0.443
4gqi	M49	Ribosyldihydronicotinamide dehydrogenase [quinone]	/	0.442
1bwl	FMN	NADPH dehydrogenase 1	1.6.99.1	0.441
4drh	RAP	Serine/threonine-protein kinase mTOR	2.7.11.1	0.441
4drh	RAP	Peptidyl-prolyl cis-trans isomerase FKBP5	5.2.1.8	0.441
3l9l	L9L	cAMP-dependent protein kinase catalytic subunit alpha	2.7.11.11	0.440
3rup	ADP	Biotin carboxylase	6.3.4.14	0.440