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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2ok8FADFerredoxin--NADP reductase, apicoplast

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2ok8FADFerredoxin--NADP reductase, apicoplast/1.000
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.577
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.543
1gawFADFerredoxin/0.539
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.537
1h85FADFerredoxin--NADP reductase1.18.1.20.528
3zc3FADFerredoxin--NADP reductase1.18.1.20.528
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.528
1w35FADFerredoxin--NADP reductase1.18.1.20.527
1bjkFADFerredoxin--NADP reductase1.18.1.20.525
2rc6FADFerredoxin--NADP reductase/0.525
3vo2FADFerredoxin--NADP reductase/0.524
1fdrFADFerredoxin--NADP reductase1.18.1.20.519
1e64FADFerredoxin--NADP reductase1.18.1.20.518
1gjrFADFerredoxin--NADP reductase1.18.1.20.510
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.510
3w5uFADFerredoxin/0.510
1sm4FADFerredoxin--NADP reductase/0.509
3fpkFADFerredoxin-NADP reductase/0.506
1gvhFADFlavohemoprotein/0.503
1go2FADFerredoxin--NADP reductase1.18.1.20.501
1w87FADFerredoxin--NADP reductase1.18.1.20.501
1qh0FADFerredoxin--NADP reductase1.18.1.20.500
3zbtFADFerredoxin--NADP reductase1.18.1.20.500
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.499
1qgyFADFerredoxin--NADP reductase1.18.1.20.497
4yafFADNADPH--cytochrome P450 reductase/0.496
2bf4FADNADPH--cytochrome P450 reductase/0.490
4c43FADFerredoxin--NADP reductase1.18.1.20.490
3qe2FADNADPH--cytochrome P450 reductase/0.486
1ja1FADNADPH--cytochrome P450 reductase/0.485
2b5oFADFerredoxin--NADP reductase1.18.1.20.483
1h42FADFerredoxin--NADP reductase1.18.1.20.482
1gaqFADFerredoxin/0.481
1ewyFADFerredoxin--NADP reductase1.18.1.20.478
4yaoFADNADPH--cytochrome P450 reductase/0.475
1krhFADBenzoate 1,2-dioxygenase electron transfer component1.18.1.30.472
1tllFADNitric oxide synthase, brain1.14.13.390.471
3jqrFADFerredoxin--NADP reductase, apicoplast/0.469
1b2rFADFerredoxin--NADP reductase1.18.1.20.467
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.467
4y9uFADNADPH--cytochrome P450 reductase/0.466
1amoFADNADPH--cytochrome P450 reductase/0.464
4bfxZVXPantothenate kinase2.7.1.330.464
4bprFADFerredoxin--NADP reductase1.18.1.20.462
4a959MTGlycylpeptide N-tetradecanoyltransferase/0.460
1x1bSAHC-20 methyltransferase/0.459
1queFADFerredoxin--NADP reductase1.18.1.20.458
1vbmYSATyrosine--tRNA ligase6.1.1.10.458
2bpoFADNADPH--cytochrome P450 reductase/0.457
2vnjFADNADPH:ferredoxin reductase/0.457
4y7cFADNADPH--cytochrome P450 reductase/0.454
3ojxFADNADPH--cytochrome P450 reductase/0.453
1x1dSAHC-20 methyltransferase/0.452
4y9rFADNADPH--cytochrome P450 reductase/0.452
3qfcFADNADPH--cytochrome P450 reductase/0.450
4eagATP5'-AMP-activated protein kinase subunit gamma-1/0.450
4jsr1NQNAD-dependent protein deacetylase sirtuin-3, mitochondrial3.5.10.450
4uajFADNa(+)-translocating NADH-quinone reductase subunit F/0.449
1i7pFADNADH-cytochrome b5 reductase 31.6.2.20.448
1q0rAKTAclacinomycin methylesterase RdmC3.1.1.950.448
1q0zAKAAclacinomycin methylesterase RdmC3.1.1.950.448
3hl0NADMaleylacetate reductase/0.448
1ogjFADFerredoxin--NADP reductase1.18.1.20.447
1ndhFADNADH-cytochrome b5 reductase 31.6.2.20.446
2piaFMNPhthalate dioxygenase reductase/0.445
2vn1FK5Peptidylprolyl isomerase/0.445
2lfoGCHFatty acid-binding protein, liver/0.444
1jqdSAHHistamine N-methyltransferase2.1.1.80.443
4b2gV1NUncharacterized protein/0.443
2xncFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.442
3ojwFMNNADPH--cytochrome P450 reductase/0.442
4bftZVTPantothenate kinase2.7.1.330.442
4f4dCHDFerrochelatase, mitochondrial4.99.1.10.442
1f20FADNitric oxide synthase, brain1.14.13.390.441
1ib0FADNADH-cytochrome b5 reductase 31.6.2.20.441
1x1cSAHC-20 methyltransferase/0.441