Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2oanATPActin, cytoplasmic 1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2oanATPActin, cytoplasmic 1/1.000
1eqyATPActin, alpha skeletal muscle/0.554
1t44ATPActin, alpha skeletal muscle/0.551
3mn6ATPActin-5C/0.543
3a5mATPMajor actin/0.541
4pkgATPActin, alpha skeletal muscle/0.540
4k42ADPActin, alpha skeletal muscle/0.536
3mn9ATPActin-5C/0.535
1qz5ATPActin, alpha skeletal muscle/0.532
1nmdATPMajor actin/0.531
2q36ATPActin, alpha skeletal muscle/0.528
5ce3ATPActin/0.527
4cbxATPActin-2/0.526
1c0fATPMajor actin/0.524
3el2ATPActin-5C/0.524
3m6gATPActin, alpha skeletal muscle/0.523
3mn7ATPActin-5C/0.522
1lotATPActin, alpha skeletal muscle/0.520
3ffkATPActin, alpha skeletal muscle/0.520
1s22ATPActin, alpha skeletal muscle/0.518
4jhdANPActin-5C/0.518
3eksATPActin-5C/0.517
1h1vATPActin, alpha skeletal muscle/0.513
4k41ATPActin, alpha skeletal muscle/0.511
1rgiATPActin, alpha skeletal muscle/0.509
2v51ATPActin, alpha skeletal muscle/0.509
3tu5ATPActin, alpha skeletal muscle/0.509
2p9kATPActin-related protein 2/0.506
1yxqATPActin, alpha skeletal muscle/0.505
4k43ADPActin, alpha skeletal muscle/0.501
4pl8ATPActin, alpha skeletal muscle/0.498
1ijjATPActin, alpha skeletal muscle/0.494
3u4lATPActin, cytoplasmic 1/0.491
4m63ATPActin-5C/0.489
4pkhADPActin, alpha skeletal muscle/0.489
3u9dATPActin, alpha skeletal muscle/0.488
4rwtANPActin-5C/0.480
1mduATPActin, alpha skeletal muscle/0.478
3dawATPActin, alpha skeletal muscle/0.478
2q97ATPActin, alpha skeletal muscle/0.475
3uleATPActin-related protein 2/0.474
1nm1ATPMajor actin/0.462
1kxpATPActin, alpha skeletal muscle/0.448