Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2bgjFADNADPH:ferredoxin reductase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2bgjFADNADPH:ferredoxin reductase/1.000
2vnkFADNADPH:ferredoxin reductase/0.652
2vnhFADNADPH:ferredoxin reductase/0.621
3crzFADFerredoxin--NADP+ reductase/0.578
2vnjFADNADPH:ferredoxin reductase/0.524
1a8pFADFerredoxin--NADP reductase/0.520
2bgiFADNADPH:ferredoxin reductase/0.488
4b4dFADFerredoxin-NADP reductase/0.488
2qdxFADFerredoxin--NADP+ reductase/0.486