Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1z9aNADNAD(P)H-dependent D-xylose reductase1.1.1.307

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1z9aNADNAD(P)H-dependent D-xylose reductase1.1.1.3071.000
1sm9NADNAD(P)H-dependent D-xylose reductase1.1.1.3070.612
1mi3NADNAD(P)H-dependent D-xylose reductase1.1.1.3070.592
1ye4NADNAD(P)H-dependent D-xylose reductase1.1.1.3070.584
1ye6NADNAD(P)H-dependent D-xylose reductase1.1.1.3070.573
1k8cNAPNAD(P)H-dependent D-xylose reductase1.1.1.3070.565
1r38NAPNAD(P)H-dependent D-xylose reductase1.1.1.3070.510
1ye6NAPNAD(P)H-dependent D-xylose reductase1.1.1.3070.471
1vp5NAPOxidoreductase, aldo/keto reductase family/0.449
2acqNAPAldose reductase1.1.1.210.440