scPDB - Distribution of Binding site Similarity values of 1m8d entry / Site 1

Distribution of Binding site similarity measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1m8d	H4B	Nitric oxide synthase, inducible	1.14.13.39

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1m8d	H4B	Nitric oxide synthase, inducible	1.14.13.39	1.000
1m8h	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.679
2y37	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.644
1m9t	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.642
1m8i	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.636
1qom	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.634
3dwj	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.616
3e6t	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.613
1r35	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.611
3e6o	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.611
1m8e	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.609
1vaf	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.600
4ux6	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.599
1dwx	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.598
3e67	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.595
1om5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.589
2nod	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.589
3nw2	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.584
1qw5	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.582
3b3m	H4B	Nitric oxide synthase, brain	1.14.13.39	0.578
3b3p	H4B	Nitric oxide synthase, brain	1.14.13.39	0.578
3png	H4B	Nitric oxide synthase, brain	1.14.13.39	0.577
3pnf	H4B	Nitric oxide synthase, brain	1.14.13.39	0.574
1k2t	H4B	Nitric oxide synthase, brain	1.14.13.39	0.572
3rql	H4B	Nitric oxide synthase, brain	1.14.13.39	0.572
4jsg	H4B	Nitric oxide synthase, brain	1.14.13.39	0.572
3ufs	H4B	Nitric oxide synthase, brain	1.14.13.39	0.571
1rs6	H4B	Nitric oxide synthase, brain	1.14.13.39	0.569
3rqm	H4B	Nitric oxide synthase, brain	1.14.13.39	0.568
1p6j	H4B	Nitric oxide synthase, brain	1.14.13.39	0.566
4imw	H4B	Nitric oxide synthase, brain	1.14.13.39	0.565
1zzq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.563
3nlz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.561
4jsf	H4B	Nitric oxide synthase, brain	1.14.13.39	0.560
3rqj	H4B	Nitric oxide synthase, brain	1.14.13.39	0.559
4js9	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.559
4k5d	H4B	Nitric oxide synthase, brain	1.14.13.39	0.558
1zvl	H4B	Nitric oxide synthase, brain	1.14.13.39	0.557
2g6j	7AP	Nitric oxide synthase, brain	1.14.13.39	0.556
3q9a	H4B	Nitric oxide synthase, brain	1.14.13.39	0.556
3rqk	H4B	Nitric oxide synthase, brain	1.14.13.39	0.556
3nnz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.555
3svp	H4B	Nitric oxide synthase, brain	1.14.13.39	0.555
1m00	H4B	Nitric oxide synthase, brain	1.14.13.39	0.554
3e7i	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.552
3ufu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.551
3n5y	H4B	Nitric oxide synthase, brain	1.14.13.39	0.549
4fvx	H4B	Nitric oxide synthase, brain	1.14.13.39	0.549
4fvz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.548
2g6i	HBI	Nitric oxide synthase, brain	1.14.13.39	0.546
3nod	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.546
3tym	H4B	Nitric oxide synthase, brain	1.14.13.39	0.546
4lux	H4B	Nitric oxide synthase, brain	1.14.13.39	0.546
1zzu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.545
4fw0	H4B	Nitric oxide synthase, brain	1.14.13.39	0.545
3tyl	H4B	Nitric oxide synthase, brain	1.14.13.39	0.544
3b3n	H4B	Nitric oxide synthase, brain	1.14.13.39	0.543
4k5g	H4B	Nitric oxide synthase, brain	1.14.13.39	0.543
3b3o	H4B	Nitric oxide synthase, brain	1.14.13.39	0.542
3ej8	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.542
3jt5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.542
3jwv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.542
1p6k	H4B	Nitric oxide synthase, brain	1.14.13.39	0.541
3jt9	H4B	Nitric oxide synthase, brain	1.14.13.39	0.541
1k2u	H4B	Nitric oxide synthase, brain	1.14.13.39	0.540
3jta	H4B	Nitric oxide synthase, brain	1.14.13.39	0.540
3n5z	H4B	Nitric oxide synthase, brain	1.14.13.39	0.540
3uft	H4B	Nitric oxide synthase, brain	1.14.13.39	0.540
3ufw	H4B	Nitric oxide synthase, brain	1.14.13.39	0.540
5agl	H4B	Nitric oxide synthase, brain	1.14.13.39	0.540
3e7g	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.539
3jwt	H4B	Nitric oxide synthase, brain	1.14.13.39	0.539
4jsh	H4B	Nitric oxide synthase, brain	1.14.13.39	0.538
3hsn	H4B	Nitric oxide synthase, brain	1.14.13.39	0.537
2hx4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.536
3nly	H4B	Nitric oxide synthase, brain	1.14.13.39	0.536
3ufq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.536
3ufr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.536
4imt	H4B	Nitric oxide synthase, brain	1.14.13.39	0.536
3svq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.535
3ufv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.534
4cx5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.534
4k5e	H4B	Nitric oxide synthase, brain	1.14.13.39	0.534
3jt7	H4B	Nitric oxide synthase, brain	1.14.13.39	0.533
3jwu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.532
3fc5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.531
3nlv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.530
3pne	H4B	Nitric oxide synthase, brain	1.14.13.39	0.528
4eux	H4B	Nitric oxide synthase, brain	1.14.13.39	0.528
3nlo	H4B	Nitric oxide synthase, brain	1.14.13.39	0.526
4cx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.525
3nlw	H4B	Nitric oxide synthase, brain	1.14.13.39	0.524
2hx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.522
3nny	H4B	Nitric oxide synthase, brain	1.14.13.39	0.522
4jsi	H4B	Nitric oxide synthase, brain	1.14.13.39	0.522
3q99	H4B	Nitric oxide synthase, brain	1.14.13.39	0.520
1k2s	H4B	Nitric oxide synthase, brain	1.14.13.39	0.515
1mmv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.515
1zzr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.515
3nln	H4B	Nitric oxide synthase, brain	1.14.13.39	0.514
3ufo	H4B	Nitric oxide synthase, brain	1.14.13.39	0.514
4gqe	H4B	Nitric oxide synthase, brain	1.14.13.39	0.513
3dqr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.511
3nlk	H4B	Nitric oxide synthase, brain	1.14.13.39	0.511
3jt6	H4B	Nitric oxide synthase, brain	1.14.13.39	0.510
3jx2	H4B	Nitric oxide synthase, brain	1.14.13.39	0.510
3n5v	H4B	Nitric oxide synthase, brain	1.14.13.39	0.508
3jx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.507
1rs7	H4B	Nitric oxide synthase, brain	1.14.13.39	0.506
4cx4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.505
4k5f	H4B	Nitric oxide synthase, brain	1.14.13.39	0.503
4ug7	H4B	Nitric oxide synthase oxygenase	1.14.13.165	0.502
4fvy	H4B	Nitric oxide synthase, brain	1.14.13.39	0.501
3jt4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.500
3nlr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.500
3jt8	H4B	Nitric oxide synthase, brain	1.14.13.39	0.498
3jx6	H4B	Nitric oxide synthase, brain	1.14.13.39	0.496
4uga	H4B	Nitric oxide synthase oxygenase	1.14.13.165	0.496
3jx4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.494
3ufp	H4B	Nitric oxide synthase, brain	1.14.13.39	0.491
3jt3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.490
4lwa	Q13	Nitric oxide synthase oxygenase	1.14.13.165	0.488
5agp	H4B	Nitric oxide synthase, brain	1.14.13.39	0.486
3nlq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.484
3nlj	H4B	Nitric oxide synthase, brain	1.14.13.39	0.483
3nlp	H4B	Nitric oxide synthase, brain	1.14.13.39	0.480
4imu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.475
5agk	H4B	Nitric oxide synthase, brain	1.14.13.39	0.475
3jx5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.474
4d1o	H4B	Nitric oxide synthase, endothelial	1.14.13.39	0.474
3nos	H4B	Nitric oxide synthase, endothelial	1.14.13.39	0.455
4ug5	H4B	Nitric oxide synthase oxygenase	1.14.13.165	0.447
3n66	XFN	Nitric oxide synthase, brain	1.14.13.39	0.445
4u0o	MTA	Lipoyl synthase 2	/	0.442
4m2a	UPG	UDP-glucose pyrophosphorylase	/	0.441