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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1a72PADAlcohol dehydrogenase E chain1.1.1.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1a72PADAlcohol dehydrogenase E chain1.1.1.11.000
1qlhNADAlcohol dehydrogenase E chain1.1.1.10.554
5adhAPRAlcohol dehydrogenase E chain1.1.1.10.524
1adfTADAlcohol dehydrogenase E chain1.1.1.10.521
1f8fNADBenzyl alcohol dehydrogenase/0.485
1heuNADAlcohol dehydrogenase E chain1.1.1.10.477
1cdoNADAlcohol dehydrogenase 11.1.1.10.470
4rquNADAlcohol dehydrogenase class-P/0.467
1e3eNAIAlcohol dehydrogenase 41.1.1.10.465
1tehNADAlcohol dehydrogenase class-31.1.1.10.464
1mp0NADAlcohol dehydrogenase class-31.1.1.10.460
1ma0NADAlcohol dehydrogenase class-31.1.1.10.455
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.452
4jjiNADAlcohol dehydrogenase class-3/0.449
1ju9NADAlcohol dehydrogenase E chain1.1.1.10.447
6adhNADAlcohol dehydrogenase E chain1.1.1.10.447
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.445
1adcPADAlcohol dehydrogenase E chain1.1.1.10.443
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.441
5kjeNAJAlcohol dehydrogenase E chain1.1.1.10.441