Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
5c8y | ACP | Tubulin tyrosine ligase |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
5c8y | ACP | Tubulin tyrosine ligase | / | 0.878 | |
4zol | ACP | Tubulin tyrosine ligase | / | 0.713 | |
4zhq | ACP | Tubulin tyrosine ligase | / | 0.690 | |
3idc | ANP | cAMP-dependent protein kinase catalytic subunit alpha | 2.7.11.11 | 0.680 | |
5la6 | ACP | Tubulin tyrosine ligase | / | 0.654 | |
2g2f | AGS | Tyrosine-protein kinase ABL1 | 2.7.10.2 | 0.650 |