2.700 Å
X-ray
2006-02-15
Name: | Tyrosine-protein kinase ABL1 |
---|---|
ID: | ABL1_HUMAN |
AC: | P00519 |
Organism: | Homo sapiens |
Reign: | Eukaryota |
TaxID: | 9606 |
EC Number: | 2.7.10.2 |
Chain Name: | Percentage of Residues within binding site |
---|---|
B | 100 % |
B-Factor: | 67.753 |
---|---|
Number of residues: | 23 |
Including | |
Standard Amino Acids: | 23 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 0 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.313 | 499.500 |
% Hydrophobic | % Polar |
---|---|
58.78 | 41.22 |
According to VolSite |
HET Code: | AGS |
---|---|
Formula: | C10H14N5O12P3S |
Molecular weight: | 521.231 g/mol |
DrugBank ID: | DB02930 |
Buried Surface Area: | 36.86 % |
Polar Surface area: | 329.24 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 17 |
H-Bond Donors: | 5 |
Rings: | 3 |
Aromatic rings: | 2 |
Anionic atoms: | 2 |
Cationic atoms: | 0 |
Rule of Five Violation: | 2 |
Rotatable Bonds: | 8 |
X | Y | Z |
---|---|---|
27.2448 | 119.358 | 37.9699 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
C4' | CB | LEU- 248 | 4.27 | 0 | Hydrophobic |
C1' | CB | LEU- 248 | 4.19 | 0 | Hydrophobic |
N6 | O | GLU- 316 | 3.4 | 156.81 | H-Bond (Ligand Donor) |
N1 | N | MET- 318 | 2.86 | 169.64 | H-Bond (Protein Donor) |
O3' | ND2 | ASN- 322 | 2.97 | 143.01 | H-Bond (Protein Donor) |
O2' | N | ASN- 322 | 3.13 | 143.41 | H-Bond (Protein Donor) |
O2' | ND2 | ASN- 322 | 3.38 | 143.55 | H-Bond (Protein Donor) |
C2' | CB | ASN- 322 | 4.23 | 0 | Hydrophobic |