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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4psw COA Histone acetyltransferase type B catalytic subunit

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4psw COAHistone acetyltransferase type B catalytic subunit / 1.072
1bob ACOHistone acetyltransferase type B catalytic subunit / 0.710
1wwz ACOUncharacterized protein / 0.710
2fxf ACODiamine acetyltransferase 1 / 0.710
1qsm ACOHistone acetyltransferase HPA2 / 0.699
2cy2 ACOProbable acetyltransferase / 0.696
4jwp ACOGCN5-related N-acetyltransferase / 0.682
5kgj ACOPredicted acetyltransferase / 0.681
1mj9 COAHistone acetyltransferase ESA1 / 0.669
1pua COAHAT A1 / 0.667
3bj7 COADiamine acetyltransferase 1 / 0.665
1mja COAHistone acetyltransferase ESA1 / 0.663
2vez ACOGlucosamine 6-phosphate acetyltransferase, putative / 0.661
1mjb ACOHistone acetyltransferase ESA1 / 0.658
5kgh ACOPredicted acetyltransferase / 0.656
1ib1 COTSerotonin N-acetyltransferase / 0.654
3vwe COAAlpha-tubulin N-acetyltransferase 1 / 0.654
4psx COAHistone acetyltransferase type B catalytic subunit / 0.654
4u9z COAAlpha-tubulin N-acetyltransferase 1 / 0.653
2b3v ACODiamine acetyltransferase 1 / 0.652
5kf1 ACOPredicted acetyltransferase / 0.652