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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4lwb QJ8 Nitric oxide synthase oxygenase 1.14.13.165

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4lwb QJ8Nitric oxide synthase oxygenase 1.14.13.165 0.899
4ug9 1EWNitric oxide synthase oxygenase 1.14.13.165 0.730
4uga Q05Nitric oxide synthase oxygenase 1.14.13.165 0.729
4k5g Q13Nitric oxide synthase, brain 1.14.13.39 0.727
4lwa Q13Nitric oxide synthase oxygenase 1.14.13.165 0.710
4ug7 1EVNitric oxide synthase oxygenase 1.14.13.165 0.708
4jsg Q10Nitric oxide synthase, brain 1.14.13.39 0.701
4ug5 XFKNitric oxide synthase oxygenase 1.14.13.165 0.700
4lux QJ8Nitric oxide synthase, brain 1.14.13.39 0.699
3jwu J11Nitric oxide synthase, brain 1.14.13.39 0.696
4jsf QJ4Nitric oxide synthase, brain 1.14.13.39 0.696
4jsj QJ7Nitric oxide synthase, brain 1.14.13.39 0.693
3nlr JRSNitric oxide synthase, brain 1.14.13.39 0.687
4jsh Q15Nitric oxide synthase, brain 1.14.13.39 0.686
4jsi Q05Nitric oxide synthase, brain 1.14.13.39 0.686
3n5x XFKNitric oxide synthase, brain 1.14.13.39 0.685
4k5f Q14Nitric oxide synthase, brain 1.14.13.39 0.683
3n66 XFNNitric oxide synthase, brain 1.14.13.39 0.681
4k5e 1Q7Nitric oxide synthase, brain 1.14.13.39 0.681
3jx4 J11Nitric oxide synthase, brain 1.14.13.39 0.680
3jx5 J14Nitric oxide synthase, brain 1.14.13.39 0.680
3n60 XFNNitric oxide synthase, brain 1.14.13.39 0.680
3e68 AT6Nitric oxide synthase, inducible 1.14.13.39 0.676
3jx2 JI4Nitric oxide synthase, brain 1.14.13.39 0.674
3nln JRSNitric oxide synthase, brain 1.14.13.39 0.674
3nnz 59WNitric oxide synthase, brain 1.14.13.39 0.672
3jx0 JI4Nitric oxide synthase, brain 1.14.13.39 0.669
3n63 XFNNitric oxide synthase, brain 1.14.13.39 0.669
3n5y XFLNitric oxide synthase, brain 1.14.13.39 0.668
3n61 XFJNitric oxide synthase, brain 1.14.13.39 0.668
3nlp JSSNitric oxide synthase, brain 1.14.13.39 0.667
3tyl AXWNitric oxide synthase, brain 1.14.13.39 0.667
3tym 08RNitric oxide synthase, brain 1.14.13.39 0.663
3ufq HW5Nitric oxide synthase, brain 1.14.13.39 0.662
4jse QJ2Nitric oxide synthase, brain 1.14.13.39 0.661
3ufp H4WNitric oxide synthase, brain 1.14.13.39 0.660
4eux HW1Nitric oxide synthase, brain 1.14.13.39 0.659
3ufr H5WNitric oxide synthase, brain 1.14.13.39 0.656
3b3o JI3Nitric oxide synthase, brain 1.14.13.39 0.654
1qw5 14WNitric oxide synthase, inducible 1.14.13.39 0.653
3jws JI4Nitric oxide synthase, brain 1.14.13.39 0.653
4imt 1EWNitric oxide synthase, brain 1.14.13.39 0.653
3nlo JSRNitric oxide synthase, brain 1.14.13.39 0.650