sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4jxr | ACO | Acetyltransferase |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 4jxr | ACO | Acetyltransferase | / | 1.093 | |
| 3dr8 | ACO | L-methionine sulfoximine/L-methionine sulfone acetyltransferase | / | 0.807 | |
| 4u9v | ACO | N-alpha-acetyltransferase 40 | 2.3.1 | 0.750 | |
| 1i12 | ACO | Glucosamine 6-phosphate N-acetyltransferase | / | 0.718 | |
| 4ri1 | ACO | UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase | 2.3.1.202 | 0.717 | |
| 2cns | ACO | Ribosomal-protein-alanine acetyltransferase | / | 0.715 | |
| 2bei | ACO | Diamine acetyltransferase 2 | 2.3.1.57 | 0.712 | |
| 4jwp | ACO | GCN5-related N-acetyltransferase | / | 0.702 | |
| 1b87 | ACO | Aac(6')-Ii protein | / | 0.696 | |
| 3f0a | ACO | Spermidine N(1)-acetyltransferase | / | 0.689 | |
| 3exn | ACO | Probable acetyltransferase | / | 0.688 | |
| 3zj0 | ACO | Putative acetyltransferase OgpAT | / | 0.688 | |
| 2fxf | ACO | Diamine acetyltransferase 1 | / | 0.685 | |
| 1tiq | COA | Spermidine/spermine N(1)-acetyltransferase | / | 0.681 | |
| 2a4n | COA | Aac(6')-Ii protein | / | 0.678 | |
| 5kf8 | COA | Predicted acetyltransferase | / | 0.678 | |
| 1kuy | COT | Serotonin N-acetyltransferase | / | 0.677 | |
| 2jdd | ACO | Probable acetyltransferase | / | 0.677 | |
| 2vez | ACO | Glucosamine 6-phosphate acetyltransferase, putative | / | 0.675 | |
| 4r3k | COA | N-alpha-acetyltransferase | 2.3.1 | 0.671 | |
| 2bsw | CAO | Probable acetyltransferase | / | 0.669 | |
| 4ua3 | COA | N-alpha-acetyltransferase 40 | 2.3.1 | 0.669 | |
| 3gya | COA | GCN5-related N-acetyltransferase | / | 0.668 | |
| 4ava | ACO | Acetyltransferase Pat | 2.3.1 | 0.668 | |
| 4kub | COA | Uncharacterized protein | / | 0.666 | |
| 4xnh | ACO | N-terminal acetyltransferase A complex subunit NAT5 | 2.3.1 | 0.665 | |
| 3pgp | ACO | Uncharacterized protein | / | 0.664 | |
| 5kf1 | ACO | Predicted acetyltransferase | / | 0.664 | |
| 5kgp | ACO | Predicted acetyltransferase | / | 0.664 | |
| 5kf8 | ACO | Predicted acetyltransferase | / | 0.660 | |
| 1qsm | ACO | Histone acetyltransferase HPA2 | / | 0.659 | |
| 3mgd | ACO | Predicted acetyltransferase | / | 0.659 | |
| 3s6f | COA | Uncharacterized protein | / | 0.657 | |
| 1j4j | ACO | Acetyltransferase | 2.3.1 | 0.654 | |
| 2jdc | CAO | Probable acetyltransferase | / | 0.652 | |
| 4ag9 | COA | Glucosamine 6-phosphate N-acetyltransferase | / | 0.652 | |
| 5kgj | ACO | Predicted acetyltransferase | / | 0.652 | |
| 2cy2 | ACO | Probable acetyltransferase | / | 0.651 |