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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4jsi H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.950
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.924
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.923
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.922
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.920
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.918
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.917
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.916
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.916
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.916
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.909
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.908
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.905
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.905
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.905
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.905
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.905
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.905
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.904
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.904
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.904
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.903
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.903
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.903
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.902
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.902
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.902
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.900
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.899
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.899
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.898
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.897
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.897
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.896
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.896
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.896
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.894
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.894
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.891
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.891
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.890
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.887
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.886
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.886
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.884
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.884
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.884
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.884
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.883
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.883
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.882
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.881
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.873
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.872
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.870
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.869
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.869
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.868
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.868
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.867
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.867
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.867
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.866
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.866
3png H4BNitric oxide synthase, brain 1.14.13.39 0.865
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.863
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.859
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.859
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.858
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.856
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.855
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.853
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.852
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.851
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.850
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.847
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.845
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.844
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.844
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.843
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.842
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.841
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.840
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.839
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.835
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.833
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.828
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.827
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.826
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.824
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.823
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.818
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.804
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.787
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.780
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.779
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.775
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.751
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.748
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.716
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.715
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.714
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.695
3nw2 H4BNitric oxide synthase, inducible 1.14.13.39 0.694
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.690
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.677
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.675
4e5f 0N7Polymerase acidic protein / 0.660
1m8i H4BNitric oxide synthase, inducible 1.14.13.39 0.659
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.650
3nod H4BNitric oxide synthase, inducible 1.14.13.39 0.650