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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4j3m AJ8 Tankyrase-2 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4j3m AJ8Tankyrase-2 2.4.2.30 0.948
4j21 AJ6Tankyrase-2 2.4.2.30 0.846
4iue AJ4Tankyrase-2 2.4.2.30 0.834
4j22 AJ7Tankyrase-2 2.4.2.30 0.804
4avu LDRTankyrase-2 2.4.2.30 0.744
3kr8 XAVTankyrase-2 2.4.2.30 0.685
4bu9 08CTankyrase-2 2.4.2.30 0.681
4bue JQFTankyrase-2 2.4.2.30 0.667
4l0v 1V1Tankyrase-2 2.4.2.30 0.664
4l6s 1WQPoly [ADP-ribose] polymerase 1 2.4.2.30 0.662
4hlk 431Tankyrase-2 2.4.2.30 0.661
4buu F38Tankyrase-2 2.4.2.30 0.659
4buw F33Tankyrase-2 2.4.2.30 0.659
4buv 16ITankyrase-2 2.4.2.30 0.655
4bud 29FTankyrase-2 2.4.2.30 0.654