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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4cx3 H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.918
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.913
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.913
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.912
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.912
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.912
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.912
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.911
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.911
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.911
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.911
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.911
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.911
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.910
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.909
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.909
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.909
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.909
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.908
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.907
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.906
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.905
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.904
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.902
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.901
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.897
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.893
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.893
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.892
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.892
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.892
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.892
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.892
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.891
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.891
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.890
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.890
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.888
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.888
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.886
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.886
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.886
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.886
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.884
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.879
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.879
3png H4BNitric oxide synthase, brain 1.14.13.39 0.877
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.875
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.875
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.875
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.875
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.875
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.874
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.873
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.873
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.873
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.873
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.872
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.872
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.871
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.871
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.870
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.869
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.868
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.866
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.865
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.862
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.862
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.857
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.856
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.856
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.855
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.855
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.854
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.854
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.853
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.853
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.853
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.852
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.852
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.850
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.849
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.848
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.848
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.848
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.836
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.820
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.818
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.818
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.817
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.808
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.807
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.806
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.796
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.786
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.765
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.745
4e5i 0N9Polymerase acidic protein / 0.744
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.726
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.721
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.714
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.709
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.695
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.681
3ej8 H4BNitric oxide synthase, inducible 1.14.13.39 0.671
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.665
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.664
4e5f 0N7Polymerase acidic protein / 0.660
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.656
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.653
3e67 H4BNitric oxide synthase, inducible 1.14.13.39 0.652
4gvq N4MMethenyltetrahydromethanopterin cyclohydrolase 3.5.4.27 0.652