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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3zqt TES Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3zqt TESAndrogen receptor / 1.112
4k7a DHTAndrogen receptor / 0.996
1t7f DHTAndrogen receptor / 0.981
2z4j DHTAndrogen receptor / 0.964
1t76 DHTAndrogen receptor / 0.958
2q7l TESAndrogen receptor / 0.949
1xow R18Androgen receptor / 0.840
1gs4 ZK5Androgen receptor / 0.811
2ao6 R18Androgen receptor / 0.792
1xq3 R18Androgen receptor / 0.767
4ofr DHTAndrogen receptor / 0.766
2piq DHTAndrogen receptor / 0.760
4oez DHTAndrogen receptor / 0.746
1t79 DHTAndrogen receptor / 0.740
2ab2 SNLMineralocorticoid receptor / 0.736
2piu DHTAndrogen receptor / 0.725
1t7m DHTAndrogen receptor / 0.719
2ylo TESAndrogen receptor / 0.706
4ofu DHTAndrogen receptor / 0.705
2yhd TESAndrogen receptor / 0.702
3g1r FIT3-oxo-5-beta-steroid 4-dehydrogenase / 0.702
2ylq TESAndrogen receptor / 0.701
2pip DHTAndrogen receptor / 0.700
1kdm DHTSex hormone-binding globulin / 0.697
4e5l DBHPolymerase acidic protein / 0.696
2am9 TESAndrogen receptor / 0.685
3vhu SNLMineralocorticoid receptor / 0.685
4at2 ASDPossible succinate dehydrogenase / 0.683
2ylp TESAndrogen receptor / 0.681
1qyw 5SDEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.680
3uzz TES3-oxo-5-beta-steroid 4-dehydrogenase / 0.680
2jn3 JN3Fatty acid-binding protein, liver / 0.678
2aa7 1CAMineralocorticoid receptor / 0.677
2q7i TESAndrogen receptor / 0.677
3cot STR3-oxo-5-beta-steroid 4-dehydrogenase / 0.677
2abi 1CAMineralocorticoid receptor / 0.670
4c49 HCYCorticosteroid-binding globulin / 0.669
5epo TUD7-alpha-hydroxysteroid deydrogenase / 0.669
1lnm DTXBilin-binding protein / 0.667
1lhw ESMSex hormone-binding globulin / 0.665
2q7j TESAndrogen receptor / 0.665
1t65 DHTAndrogen receptor / 0.664
4hlw TESAndrogen receptor / 0.659
2b01 TUDPhospholipase A2, major isoenzyme 3.1.1.4 0.658
2pio DHTAndrogen receptor / 0.658
1f5f DHTSex hormone-binding globulin / 0.656
2qpy DHTAndrogen receptor / 0.655
4apu A2KProgesterone receptor / 0.655
1ya3 STRMineralocorticoid receptor / 0.653
2j7x ESTEstrogen receptor beta / 0.653