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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3svq H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.860
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.841
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.841
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.841
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.839
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.838
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.838
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.837
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.836
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.834
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.834
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.833
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.833
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.833
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.833
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.832
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.830
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.827
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.827
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.826
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.825
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.825
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.825
3png H4BNitric oxide synthase, brain 1.14.13.39 0.825
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.825
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.825
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.824
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.824
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.824
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.824
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.824
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.823
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.823
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.823
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.823
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.823
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.823
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.823
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.823
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.823
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.822
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.822
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.822
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.822
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.822
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.822
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.821
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.821
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.821
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.821
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.821
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.820
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.820
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.820
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.819
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.818
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.817
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.816
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.816
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.815
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.815
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.815
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.813
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.812
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.811
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.811
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.811
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.808
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.808
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.807
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.806
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.803
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.801
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.801
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.801
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.793
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.792
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.791
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.791
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.789
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.789
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.787
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.786
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.786
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.784
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.783
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.781
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.777
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.777
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.774
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.774
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.771
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.769
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.763
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.762
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.761
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.754
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.747
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.743
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.739
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.724
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.724
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.721
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.707
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.704
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.698
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.698
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.696
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.691
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.683
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.681
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.678
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.664
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.664
1m8i H4BNitric oxide synthase, inducible 1.14.13.39 0.651