Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3r5z F42 Uncharacterized protein

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3r5z F42Uncharacterized protein / 1.478
3r5y F42Uncharacterized protein / 0.979
3r5w F42Deazaflavin-dependent nitroreductase / 0.847
2i02 FMNPyridoxamine 5'-phosphate oxidase-related, FMN-binding / 0.754
2hq9 FADMll6688 protein / 0.738
3w5h FADNADH-cytochrome b5 reductase 3 1.6.2.2 0.735
1umk FADNADH-cytochrome b5 reductase 3 1.6.2.2 0.731
2i51 FMNPyridoxamine 5'-phosphate oxidase-related, FMN-binding / 0.712
1ty9 FMNPhenazine biosynthesis protein PhzG 1.4 0.707
1ep3 FADDihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit / 0.706
2r6h FADNa(+)-translocating NADH-quinone reductase subunit F / 0.699
1gjr FADFerredoxin--NADP reductase 1.18.1.2 0.695
3qft FADNADPH--cytochrome P450 reductase / 0.693
4f07 FADStyrene monooxygenase component 2 / 0.693
1amo FADNADPH--cytochrome P450 reductase / 0.692
1ja1 FADNADPH--cytochrome P450 reductase / 0.692
4hms FMNPhenazine biosynthesis protein PhzG 1.4 0.692
3ojx FADNADPH--cytochrome P450 reductase / 0.690
4hmx FMNPyridoxamine 5'-phosphate oxidase / 0.689
2dji FADPyruvate oxidase / 0.687
2bf4 FADNADPH--cytochrome P450 reductase / 0.684
3qfr FADNADPH--cytochrome P450 reductase / 0.683
1i0s FMNFerric-chelate reductase (NAD(P)H) / 0.678
3qe2 FADNADPH--cytochrome P450 reductase / 0.677
1w34 FADFerredoxin--NADP reductase 1.18.1.2 0.674
1w35 FADFerredoxin--NADP reductase 1.18.1.2 0.673
2rc6 FADFerredoxin--NADP reductase / 0.672
2b5o FADFerredoxin--NADP reductase 1.18.1.2 0.670
2bn4 FADNADPH--cytochrome P450 reductase / 0.670
4hmw FMNPyridoxamine 5'-phosphate oxidase / 0.669
1f20 FADNitric oxide synthase, brain 1.14.13.39 0.668
1gr1 FADFerredoxin--NADP reductase 1.18.1.2 0.668
1que FADFerredoxin--NADP reductase 1.18.1.2 0.667
4y9r FADNADPH--cytochrome P450 reductase / 0.667
1ogi FADFerredoxin--NADP reductase 1.18.1.2 0.666
1j9z FADNADPH--cytochrome P450 reductase / 0.665
4c43 FADFerredoxin--NADP reductase 1.18.1.2 0.663
3ept FDAPutative FAD-monooxygenase / 0.662
4ylf FADDihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit homolog / 0.661
2vyq FADFerredoxin--NADP reductase 1.18.1.2 0.660
5ahk FADAcetolactate synthase II, large subunit / 0.660
1w87 FADFerredoxin--NADP reductase 1.18.1.2 0.658
3vy2 FMNFMN-binding protein / 0.658
3zc3 FADFerredoxin--NADP reductase 1.18.1.2 0.656
2xnc FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic 1.18.1.2 0.655
3a6q FMNFMN-binding protein / 0.655
4fk8 FADFerredoxin--NADP reductase / 0.655
1v5e FADPyruvate oxidase / 0.654
3a6r FMNFMN-binding protein / 0.654
4y7c FADNADPH--cytochrome P450 reductase / 0.654
1e62 FADFerredoxin--NADP reductase 1.18.1.2 0.653
1flm FMNFMN-binding protein / 0.652
4hh0 FMNAppA protein / 0.652
4ybn FADFlavin-nucleotide-binding protein / 0.651
1pkv RBFRiboflavin synthase 2.5.1.9 0.650