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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3png H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3png H4BNitric oxide synthase, brain 1.14.13.39 0.918
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.907
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.907
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.906
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.905
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.900
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.892
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.892
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.892
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.891
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.891
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.891
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.891
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.891
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.890
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.890
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.890
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.890
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.890
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.889
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.889
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.889
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.889
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.889
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.889
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.888
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.888
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.887
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.887
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.886
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.885
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.885
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.884
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.884
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.883
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.880
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.877
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.876
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.876
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.874
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.872
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.872
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.871
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.868
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.867
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.866
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.865
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.865
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.863
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.862
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.861
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.859
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.858
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.857
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.857
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.856
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.856
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.856
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.856
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.855
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.854
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.854
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.853
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.852
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.851
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.849
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.848
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.847
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.846
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.846
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.844
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.837
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.835
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.834
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.834
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.832
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.831
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.826
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.825
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.819
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.818
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.817
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.814
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.809
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.809
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.808
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.806
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.798
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.798
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.796
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.781
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.775
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.774
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.758
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.747
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.734
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.728
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.725
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.723
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.720
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.705
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.663
4e5f 0N7Polymerase acidic protein / 0.660
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.655